Brassica rapa (field mustard): 103863274
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Entry
103863274 CDS
T03449
Name
(RefSeq) serine/threonine-protein kinase ATG1b isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103863274
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
brp01001
]
103863274
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103863274
03029 Mitochondrial biogenesis [BR:
brp03029
]
103863274
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103863274
Protein kinases [BR:
brp01001
]
Serine/threonine kinases: Other
ULK family [OT]
103863274
Membrane trafficking [BR:
brp04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
103863274
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103863274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
Kdo
Pkinase_fungal
YrbL-PhoP_reg
APH
DUF5888
Motif
Other DBs
NCBI-GeneID:
103863274
NCBI-ProteinID:
XP_009139279
UniProt:
M4DED5
LinkDB
All DBs
Position
A04:complement(3861901..3867857)
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AA seq
713 aa
AA seq
DB search
MAQLAAAAGRRIGDYAVGRQIGSGSFSVVWEGRHLVDGSVVAIKEIAMARLSKKLQDSLM
SEIIILRKINHPNIIRFIDMIEAPGKINLVLEYCKGGDLSMFIQRHGKIPDATAKHFMQQ
LAAGLQVLRDNNIIHRDLKPQNLLLSTDDNDAALKIADFGFARSLQPRGLAETLCGSPLY
MAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNSQVQLFQNIMRSTELHFPVDCRD
LTSDCKDLCQKLLRRNPVERLTFEEFFHHPFLSDRQPYDVPRSRSGSRTMDGFHSSGSSP
SGKMEEVSHDDSLPFFLDDDSSEPEGSPSYTKHTSPMKSSYGFSVETRRERREAAASSPL
KNMELNSRYSRVSHRADTNNFKFESHRLLDINQFKPSSLPDSRSLSTQGRVVDTPDSIDQ
DYVLISGPSVDIPSSSSGSPKLFNYPFKSPSPPVEFVKRSVTSSTAPMPIAGATGRTIGR
FESLESPNSLPGTSHGSLNLVDAFEQPSTHSFTRIRSLQKCAATIAELVREKIESGKQLE
AFSIQLVILAIWNQALHICHTQAASGVEGSLRQDGNRVRRNISQEGSEKILSQIQREFVL
EVERAEDLAKFVESGNTKMPDAMEIIFQAALTLGIRGGVDEVVMGEAENAVNLYTKAVRL
LVFLVVEAQTLILNPPLTLTNSVRYRIRTYIDNLISRLKHLQSHKRTSGPQKP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttggcggcggcggcggggaggagaataggggattacgcggtgggaagacaa
atcgggtcgggttcgttttcggtggtgtgggaagggaggcatctggtagatggaagcgtg
gttgcaatcaaggagatagccatggcgaggcttagtaagaagttgcaagatagtctcatg
tcggagattatcatcttgaggaagatcaatcaccccaacatcatccgcttcatcgacatg
atcgaggctccagggaaaataaacttggtgttggagtactgtaaagggggtgatctgtct
atgtttattcagcgtcatggaaaaatccctgatgctactgctaagcacttcatgcagcag
ttagctgctggtttgcaagttcttcgtgacaataatatcattcaccgagatttaaagcct
cagaatcttcttctatccacagatgataatgatgcagctcttaagattgctgattttgga
tttgcaagatcgttgcagcctaggggtctggcagaaactttatgtggttccccattgtat
atggccccagagataatgcagcttcagaagtatgatgcaaaggcagatctctggagtgtt
ggtgctatattatttcaacttgtgaccggcagaaccccttttacaggaaacagccaagtt
cagttgttccagaacattatgagatcaactgaattgcattttccagtagactgtagagat
ttgactagtgactgtaaagatctatgtcagaaattgctgcgccgtaatccagtggaacgt
ttaacgtttgaagagttctttcaccacccttttctttcagacagacaaccatatgatgtg
ccaaggagtagatcaggttcaagaacgatggatggttttcattcatccggaagcagtccc
tcaggaaaaatggaagaagtttctcatgatgactctttgcccttctttttagatgatgat
tctagtgaacctgagggaagcccttcatataccaaacatacatctccgatgaagtcatct
tatggatttagtgttgagactagacgtgaaagaagggaagcagcagcatctagtcctttg
aaaaacatggaactcaattccagatatagtagagttagtcatagagcagataccaataac
ttcaagttcgaaagccatagattattagatataaaccaattcaaaccatcaagcttgcct
gattccagatcacttagtactcaaggaagagtagtagatacaccagattcaatagatcaa
gattatgttctgatatctggaccatcagtggatataccatcatcttcatctggttctccg
aagctcttcaattacccattcaaatcaccttcccctcctgtggagttcgttaaaagaagt
gtaacaagttcaacggctcctatgccaatagctggtgccactggcaggaccattggtcgg
tttgaaagcttggagagtccaaattctctcccgggtacttcccatgggtctctgaacctt
gtggatgcttttgaacagccatcaactcacagcttcacaagaatccggtctttgcaaaag
tgtgcagcaacgattgcagagttggttcgtgaaaagattgaatcaggtaaacagttagaa
gctttctcaatccaactggtgattcttgctatttggaatcaagcactgcacatctgtcat
actcaggcagcctcaggcgtagaaggaagcctgcgccaagatggtaacagagtaagaaga
aatattagccaagaaggatcagagaaaatattgtctcagatacagagagagtttgtcttg
gaggttgagcgtgctgaagatcttgccaagtttgttgaatctggcaatacaaagatgcct
gatgcaatggagataatattccaagcagctcttactcttggcatacgtggtggagtagat
gaggtggtgatgggagaggcagagaacgcagtaaacctctacacaaaagcggtacgctta
ctagtcttccttgtggttgaggcgcaaacgctgattctgaatccacctttgacactcaca
aactcagtaaggtatcgaatcagaacatatatagataacctcataagcagattaaaacac
ctacaatcacataaaagaacttctggtccccagaaaccatga
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