Brassica rapa (field mustard): 103863315
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Entry
103863315 CDS
T03449
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103863315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103863315
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103863315
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Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
103863315
NCBI-ProteinID:
XP_009139321
UniProt:
M4DBN9
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Position
A01:8652400..8655285
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AA seq
200 aa
AA seq
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MAMSQIVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAGLVPDWKVGECVATWW
RPNFETMMYPYCPPHITKPKECKRLYVVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFHFNMISS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtctcagattgtgaacacgtacccgctttcgaactacagcttcggaacaaaa
gaaccgaagctcgaaaaagacacctccgtcgcggatcgactcgctcgtatgaagatcaac
tatatgaaagagggcatgaggactagcgttgacgccattctgctggtacaagaacacaac
catcctcacatacttctcttgcaaattggtaacacattctgcaaacttccaggtggacgc
ctgaagcctggagagaatgaagttgaaggcctgaagagaaagttgaccagtaagcttgga
ggcaattccgctggtcttgtacctgattggaaggtaggagaatgtgttgctacttggtgg
cgtccaaactttgaaaccatgatgtacccttactgccctcctcacatcacgaaaccaaag
gaatgtaagagactctatgtggttcacttgtctgagaaagagtactttgcagtgcccaaa
aacttgaagctcttggccgtccctttgtttgaactctatgacaacgttcagagatatggg
ccagttatatcgaccattcctcaacagctgtccagattccatttcaacatgattagttcg
tga
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