Brassica rapa (field mustard): 103863431
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Entry
103863431 CDS
T03449
Name
(RefSeq) dystrophia myotonica WD repeat-containing protein isoform X1
KO
K24741
WD repeat-containing protein 20
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
brp04990
]
103863431
Domain-containing proteins not elsewhere classified [BR:
brp04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
103863431
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_Nup120_160
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR19_1st
Pep3_Vps18
Beta-prop_WDR75_1st
Cytochrom_D1
WD40_RFWD3
eIF2A
Motif
Other DBs
NCBI-GeneID:
103863431
NCBI-ProteinID:
XP_033145904
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Position
A04:complement(4179706..4189298)
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AA seq
558 aa
AA seq
DB search
MMNTSNGMVSAPPSSSSPAANPQSPGIKTYFKTPEGKYKLHYEKTHSSSLLHYAHGKTVT
QVTLAQLKERAAPSTPTGTSSGYSASSGFRSATARLLGTGNGNRALSFVGGNGSGKNAST
SSRISGSFAASNSGTSLTNTNFDGKGTYLVFNVGDAIFICDLNSQDKDPVKSIHFSNSNP
MCHAFDPDAKDGHDLLIGLNSGDVYTVSLRQQLQDVSKKLVGALHYNKDGSVNNSRCTSI
AWVPGGDGAFVVAHADGNLYVYEKNKDSATDSTFPAIRDPTQFSVDKAKNSKSNPVARWH
ICQGSINSIAFSNDGSHLATVGRDGYLRIFDFSTQKLICGGKSYYGALLCCSWSMDGKYI
LTGGEDDLVQVWSMDDRKVVAWGEGHNSWVSGVAFDSYWSSPNTDGSGEHIMYRFGSVGQ
DTQILLWDLEMDEIVVPLRRPPGGSPTYSTGSQSAHWDNVIPVGTLQPAPCKRDVPKLSP
VIAHRVHTEPLSGLMFTQESVVTACREGHLKIWTRPSASETQANSSEANPAISLLSTSFP
KDNKGSLSSKIGGSSLKS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacacttctaacggaatggtatcagcgccaccttcctcctcttcacctgccgcg
aatcctcagtcgccggggattaagacttatttcaagacgcctgaaggcaagtacaagctc
cactacgagaagactcattcttccagcctccttcactacgctcatggcaaaaccgttact
caggtaactctagctcagcttaaggaaagagcggctccttccactccgaccggtacttcg
tcgggttacagtgccagtagcgggttccgttcagcaacagcgagattgctaggcactgga
aatggaaaccgtgcgcttagttttgttggaggtaatggaagtggcaaaaatgcgagtact
agttcaaggattagtgggtcctttgctgcttctaattctggcacgtcgttgacgaatact
aactttgatgggaaaggaacttacttggtcttcaatgtgggtgatgctatttttatctgt
gacttgaactcacaagacaaggatccagtaaagtctattcatttcagcaattcaaaccct
atgtgccatgcttttgatccggatgctaaggatggacatgatttacttattgggctcaat
tctggggatgtgtacactgtatcgctgagacagcagttacaggatgtctctaagaagcta
gttggagccctgcattataataaggacggctctgtaaataacagtcgttgtacaagtatt
gcttgggtgcctggaggcgatggagcatttgtcgttgctcatgccgatggcaatttgtac
gtgtatgagaagaacaaagatagtgccactgactcgacatttcctgctataagagatcct
acacaattttcagttgacaaagcaaaaaatagcaagagtaatcctgttgcgagatggcat
atctgtcaaggttcaatcaacagcattgcattctcaaatgatggttcacacttggctact
gttggaagagatggttatcttcgcatttttgacttctcaacgcagaagctaatatgtggt
ggaaaaagttattacggtgctctgctgtgctgttcgtggagtatggatggaaagtacatt
ttgaccggaggtgaagatgacttggttcaagtgtggagtatggatgatcggaaggtcgtg
gcgtggggtgaggggcataactcgtgggtaagtggagtagcgtttgattcctattggtcg
tcaccaaatacggatgggtcaggagagcatatcatgtaccggtttggatcagttggtcag
gacacacagatacttctctgggacctggaaatggacgagatcgtggtaccacttaggcga
cctccaggaggatctcccacttacagcacgggaagccaatcggctcactgggacaatgtc
ataccagtgggaactcttcaacccgctccttgcaagcgtgatgttccaaagctctcaccg
gtcatagctcaccgtgttcacaccgagcccctctccggcttgatgttcacacaagaatct
gtggtaacggcttgccgagaagggcatttaaagatctggacaaggcctagtgcctcagaa
acccaagccaacagctcagaagcaaatcctgcaatatctctcttgagcacaagcttcccc
aaagacaacaaaggttcactgagcagcaagatcggtggttctagtttaaagtcataa
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