Brassica rapa (field mustard): 103863786
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Entry
103863786 CDS
T03449
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03420
Nucleotide excision repair
brp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103863786
09124 Replication and repair
03420 Nucleotide excision repair
103863786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
brp03051
]
103863786
03400 DNA repair and recombination proteins [BR:
brp03400
]
103863786
Proteasome [BR:
brp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103863786
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103863786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Dsc3_N
TECR_N
UBA_3
UBA_RAD5A
CUE
Ubiquitin_5
Ubiquitin_4
SAP130_C
Motif
Other DBs
NCBI-GeneID:
103863786
NCBI-ProteinID:
XP_009139789
UniProt:
M4EHB9
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Position
A04:8745654..8748593
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AA seq
378 aa
AA seq
DB search
MKIFVKTLKGTNFEIEVNPADTISDTKRRIETHQGAQYPAAQQMLIHQGKVLKDETTLEE
NNVVENSFIVIMLSKAKVSSSGASTASAPAPAPQAQPAQTVATPQVAAPTVSVPEPTSVA
ATVAAPSAAAASTQTDVYGQAASNLVAGNTLESTVQQILDMGGGSWDRDTVVRALRAAFN
NPERAVEYLYSGIPAQAEIPPAPQAPATGGQAANPLAQEAAPVPATGGPNANPLDLFPQG
MPAADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQAD
FLRLINEPVEGEENAMEQLEAAMPQAVTVTPEEREAIERLEAMGFDRAMVLEVFFACNKN
EELAANYLLDHMHEFEEQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtcaagactctcaaggggaccaacttcgagatcgaagtgaatccggcg
gatacgatctctgatactaagagaagaatagaaactcaccaaggtgcgcaatacccggcg
gctcagcagatgctaatccaccaaggaaaagttctcaaggatgagactacattggaagag
aacaacgttgttgagaacagtttcattgtcatcatgttgtccaaggccaaggtttcttca
agcggggcatcaactgcatctgcgcctgcaccagcacctcaggctcagcctgcacagaca
gtagctacacctcaggtggctgctccaactgtctcagttccagagcctacaagtgtagct
gcaaccgttgcagcacctagtgctgctgctgcttcgacgcaaacagatgtgtatggtcaa
gcagcgtcaaaccttgttgctgggaatactctggagtccactgttcagcaaattcttgac
atgggtggaggtagttgggaccgtgacactgttgtccgagccctgagagccgcctttaac
aaccctgaaagggctgttgaatatctctactctggaatccctgctcaagctgaaatcccg
ccagcccctcaagccccagctactggtggacaggcagcaaatcctctagcacaagaagct
gctccagttcctgcaactggtggtccaaacgcaaatccattagacctgttccctcagggc
atgcccgctgcagacgctggtgctggagctggtaatcttgatttcctgcgaaacagtcaa
cagttccaagccctgcgagctatggtacaagcgaacccacaaattctgcagcctatgctt
caggagctcggtaaacaaaacccgcagcttgtgcgtctaattcaagagcaccaggccgac
ttcctacgcttgataaatgaaccggtcgagggagaagagaacgccatggaacagttggaa
gcagccatgccacaagctgttaccgtcacacctgaagagcgtgaagccattgaacggctg
gaagcgatggggtttgatcgtgcgatggtcttggaggtgttctttgcgtgcaacaagaat
gaagaacttgcagctaactatcttctagatcacatgcacgagtttgaagaacaatag
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