Brassica rapa (field mustard): 103864654
Help
Entry
103864654 CDS
T03449
Name
(RefSeq) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103864654
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103864654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
103864654
NCBI-ProteinID:
XP_009140666
UniProt:
A0A3P5ZKT2
LinkDB
All DBs
Position
A01:8057771..8061411
Genome browser
AA seq
645 aa
AA seq
DB search
MSDQSSVHLDVKDNHVVMKNGIVELTISKPDGFVTGISYHGVNNLLESHNEDYDRGYWDL
VWSEYGTPGTTGNSERIKGTSFEVVVENEELVEISFTRKWDSSLQDHIAPINVDKRFIMR
KDVTGFYSYGIFEHLAEWPAFNLPQTRIVYKLRKDKFRYMAVADNRQRKMPLPEDRLGKR
GRPLAYPEAVLLVHPVEEEFKGEVDDKYEYSCENRDLKVHGWISHNLDLGCWQIIPSNEF
RSGGLVKQNLTSHVGPISLAMFISAHYAGEDMVMKVKAGESWKKVFGPVFTYLNCLPDQT
SDPLSLWQDAKNQMLIEVQSWPYGFPASEDYALSDKRGCINGRLLVQDKSLSDELLPANG
AFIGLAPPGEVGSWQTESKGYQFWTEADADGYFTINNIREGEYNLNAYVTGWTGDYQYEE
LITITAGCDIDVSNIIYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRF
RQYGLWERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKIGDDTYEKTTWQIKFKLEKVQ
ENSTYKLRIALATANVAELQVRMNEDESEKSLIFTTGVIGHDNTIARHGIHGLYRLYNVD
VPSEKLLEGDNTLFLTQAMTTVGAFNGLMYDYIRLEEPCLASNFH
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccaaagttctgttcacttggatgtcaaagacaaccatgtggttatgaaaaat
ggtatagtcgaactgaccatatcaaaaccagatggttttgtcactggaatctcttatcat
ggtgtcaacaatctactagaaagtcataatgaagactatgatcgaggttactgggacctt
gtttggagcgagtatggaacgcctggaaccacaggaaactccgagcggatcaaaggcaca
agttttgaagtagtagtggaaaatgaggaactggtagagatatccttcacaagaaaatgg
gattcttctctccaagatcatattgctcccattaatgtcgacaagaggttcataatgcgt
aaagatgttactggattctactcatacggaatattcgagcatctagctgaatggccagct
tttaacttgcctcagacaaggattgtttacaagcttcgtaaagacaagtttcgatacatg
gcagttgctgataacaggcagagaaaaatgccgcttccagaagatagattgggtaaaaga
ggaagaccattggcttatcctgaagctgttcttcttgttcatcctgttgaagaagagttc
aaaggagaggttgatgacaagtatgagtactcatgtgagaacagagatcttaaagtgcat
gggtggatctcgcataaccttgatttgggttgctggcaaatcattcctagcaatgagttt
agatcaggtggcttggtgaaacagaaccttacttctcatgttggtccaatcagtctcgct
atgtttataagtgctcattatgcgggtgaggacatggtgatgaaggtaaaagcaggggag
tcatggaagaaggtgtttggtcctgttttcacttaccttaattgtttgcctgaccaaacc
tctgatcctctttcactatggcaagacgctaaaaaccagatgttaattgaagtccaaagc
tggccttacggtttccccgcttcagaagactatgcattgtctgataagcgtggttgcatc
aatggtagattactagtacaagacaagtcccttagtgatgaacttttaccagcgaatggt
gctttcataggtttggctccaccaggagaggttggatcttggcaaacagaatctaaagga
tatcagttctggacagaagcagatgcagatggttattttaccataaataatatccgagaa
ggtgaatataatctaaatgcttatgtgacaggatggactggagactatcaatacgaagaa
ctgattaccatcactgcaggctgtgacattgacgttagcaatatcatctatgaaccgccc
cgagatgggccaacggtatgggaaataggaatccctgaccggtcggcagctgagttcttt
gttccagacccaaatcccaaatacatcaataagctatatattggtcatcctgacaggttt
aggcaatatgggctatgggaaagatacacagaactatatcctaaggaagatttggtgttc
accattggcgttagtgattacaaaaaagattggttctttgcacacgttaccaggaaaata
ggagatgatacttatgaaaagacgacgtggcaaataaaattcaagctcgagaaggtgcag
gaaaacagcacatacaaacttaggatcgcactagcaaccgcaaatgtagcggaattacag
gtgaggatgaacgaggatgagagtgaaaagagtttgattttcacaactggtgtaatagga
cacgacaacacgatcgcaagacatgggatacatggactctatagactttataatgtggac
gtaccaagtgagaagcttctggaaggagacaacactttgttcttgacacaagccatgact
accgttggagcttttaatggtcttatgtatgactatatccgccttgaagagccttgttta
gcttcgaactttcactaa
DBGET
integrated database retrieval system
