Brassica rapa (field mustard): 103865012
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Entry
103865012 CDS
T03449
Name
(RefSeq) ubiquitin-activating enzyme E1 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103865012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103865012
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103865012
Enzymes [BR:
brp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
103865012
Ubiquitin system [BR:
brp04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
103865012
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103865012
Exosomal proteins of other body fluids (saliva and urine)
103865012
Exosomal proteins of colorectal cancer cells
103865012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_4HB
E1_UFD
Gas_vesicle_C
Motif
Other DBs
NCBI-GeneID:
103865012
NCBI-ProteinID:
XP_009141040
UniProt:
M4DYL5
LinkDB
All DBs
Position
A04:complement(16043978..16048126)
Genome browser
AA seq
1047 aa
AA seq
DB search
MLESVSASSPIKKRRIDNSTIAASVVQHMAFGNNSNRQEIDEDLHSRQLAVYGRETMRRL
FASNVLVSGMHGLGAEIAKNLILAGVKSVTLHDERVVELWDLSSNFVFSEDDVGKNRADA
SVNKLQDLNNAVVVSSLTTCLTKEHLSSFQVVVFSDISIEKAIEFDDYCHSHQPPIAFVK
ADVRGLFGSVFCDFGPEFAVLDVDGEEPHTGIIASISNESEAFISCVDDERLEFEDGDLV
VFSEVEGMTELNDGKPRKIKSARPYSFTLEEDTTGYGTYVKGGIVTQVKQPKLLCFKPLR
EALADPGDFLFSDFSKFDRPPLLHLAFQALDRFASEAGRLPVAGSEEDAQKLISIATSIN
TGQGDLKVENVDHKLLRSFSFGAKAVLNPMAAMFGGIVGQEVVKACSGKFHPLFQFFYFD
SVESLPSEPLDSSDVAPRNSRYDAQISVFGAKLQKKLEDARVFTVGSGALGCEFLKNMAL
MGVSCGSQGKLTVTDDDIIEKSNLSRQFLFRDWNIGQAKSTVAASAAAAINPKFNIEALQ
NRVGAETENVFDDAFWENLTVVVNALDNVNARLYVDSRCLYFQKPLLESGTLGAKCNTQM
VIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSS
PVEYTNSMMSAGDAQARETLERIVECLEKEKCENFQDCLNWARLRFEDYFVNRVKQLIYT
FPEDAATSTGAPFWSAPKRFPRPLQYSSSDPSLLNFITATAILRAETFGIPVPEWTKNPK
EAAEAVDSVIVPDFEPRKDAKIVTDEKATSLTTASVDDATVINDLIAKLELCRLNLSPDF
RMKPVQFEKDDDTNYHMDVISGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMAT
GLVCLELYKVLDGGHKVEAYRNTFANLALPLFSMAEPVPPKVVKHRDMAWTVWDRWILKG
NPTLREVLQWLEDKGLNAYSISCGSCLLFNSMFPRHKERMDKKVVDLARDIAKVELPPYR
HHLDVVVACEDQDDNDVDIPLVSIYFR
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaatcagtttcagcatcgtcgccgatcaagaaacgccgtatcgataactctacg
atcgcagcttccgtcgtccagcacatggctttcgggaataactcgaaccgtcaggagatc
gacgaagatctgcacagcaggcagctcgccgtgtacggacgcgagacgatgcggcgtctc
ttcgcttcgaacgttctcgtctcggggatgcacggccttggcgctgagattgcgaagaat
ctgattcttgctggtgtgaagtctgtgacgctgcatgatgagagagtggtggagctttgg
gacttgtctagcaactttgttttctctgaggatgatgttggcaagaacagggctgatgct
tctgttaacaagctgcaggatcttaacaatgctgtggttgtttctagcttgaccacttgc
ttaaccaaagagcatctttctagtttccaggttgttgttttctctgacataagcattgaa
aaagcgattgagtttgatgactattgccacagccaccagcctcctatagcttttgtgaag
gctgatgtcagggggcttttcggctccgtgttttgcgattttgggcctgagtttgcagtt
cttgacgttgatggggaggagccgcacacaggcattatcgcctctatctctaatgagagc
gaggcctttatctcctgtgttgacgatgagagacttgagtttgaagatggtgaccttgta
gttttctctgaagttgaaggtatgacggagctcaacgatgggaaaccgaggaagattaaa
agcgcgcggccgtattcgttcaccctcgaggaggacacgacagggtatggaacgtatgtg
aagggtgggattgtcactcaggtgaaacagccgaagctgctgtgtttcaagcccttgagg
gaagcgcttgcggatccaggggattttctctttagtgatttctctaagttcgatcggcct
ccgcttcttcatttagcgttccaggcacttgatcggtttgcttctgaagctgggaggctc
cctgttgctggatctgaagaggacgctcagaagcttatatccatcgccacgtccatcaat
actggtcagggtgatttgaaggtggagaatgttgaccataagcttctgcgaagcttctcc
tttggtgccaaggctgttcttaatcccatggctgctatgtttggcggtattgttggacag
gaggttgtcaaagcttgctctggaaaattccatcccctctttcagtttttctactttgat
tcagtggagtcactcccctctgagcctctggattctagtgacgttgcaccaaggaacagc
cggtacgatgcccaaatatctgtatttggtgccaagttacagaagaaactggaagatgct
agagttttcacagtagggtctggtgctctcggctgcgagttcctgaaaaatatggctctg
atgggggtttcgtgtggaagccaagggaagttaacagtgacagatgatgatataatcgag
aagagcaacctcagtcgtcagtttctattccgtgattggaacattggacaggctaaatcc
acagttgctgcttcggctgcagcagctataaaccccaagttcaacattgaggccctgcag
aaccgtgtgggcgctgagaccgagaatgtatttgacgatgccttctgggagaacttgact
gtcgtcgtcaacgcattagataatgtcaacgcgaggctctacgttgattcgaggtgcttg
tatttccagaagcctctactcgagtctgggactctcggtgcaaagtgcaacacgcagatg
gtcatcccacacctgactgaaaattacggtgcctcgagggacccaccagagaaacaggcc
cccatgtgtacagtgcactcgttcccgcataacattgatcactgtttaacttgggctcgc
tctgagtttgagggtctacttgagaagactcccgctgaagtgaatgcatatctctctagc
ccggttgaatacactaactcaatgatgagtgctggcgatgctcaggcgagggagacgttg
gagaggatcgttgagtgtcttgaaaaggagaagtgtgagaacttccaggactgcttaaac
tgggctcgactcaggtttgaggattactttgtgaaccgtgtgaagcaattgatatacaca
tttcctgaagatgctgcgacaagtaccggagctccattctggtctgctccaaaaagattc
ccacgtccgctccagtactcctcttctgacccaagcctccttaacttcatcacggcgact
gctattctaagagcagagacgtttgggatccctgtgcccgagtggaccaaaaacccaaag
gaagcagctgaagctgtagacagtgtgatagtcccagactttgagccaaggaaagatgca
aagattgtgacggatgagaaagccaccagtttaaccactgcttcggtggatgacgctaca
gtcatcaacgacctcattgctaagcttgagctgtgtaggcttaacttgtctccagatttc
aggatgaaaccagttcagttcgaaaaggatgatgatacaaactaccacatggacgtgata
tcgggtcttgccaacatgagggcgaggaactacagcatacctgaagtcgacaagctgaaa
gcaaagttcatcgctgggagaatcatccctgccattgcgacctcaacagccatggccact
ggtctagtctgccttgagctttacaaggtccttgatggaggacacaaagtggaagcctac
aggaacacgtttgccaacctggcgcttccactcttctcaatggctgaaccggttccgcca
aaggtggtgaagcaccgcgacatggcttggaccgtttgggacagatggattctgaaagga
aaccctacactgcgtgaggtgttgcagtggctggaggacaaagggcttaacgcttacagc
atctcttgtggaagctgtctcctgttcaacagtatgtttccgaggcacaaggagaggatg
gacaagaaagtggtggatctcgctagggatattgctaaagtggagttgccgccttaccgt
caccatcttgatgtagtggtggcttgtgaggatcaagatgacaatgacgtcgatattcct
ctcgtctctatctatttcaggtga
DBGET
integrated database retrieval system
