Brassica rapa (field mustard): 103865054
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Entry
103865054 CDS
T03449
Name
(RefSeq) probable galacturonosyltransferase 5 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00520
Amino sugar and nucleotide sugar metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
103865054
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
brp01003
]
103865054
Enzymes [BR:
brp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
103865054
Glycosyltransferases [BR:
brp01003
]
Polysaccharide
Structural polysaccharide
103865054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
103865054
NCBI-ProteinID:
XP_009141079
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Position
A04:complement(16297933..16302194)
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AA seq
610 aa
AA seq
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MNQIRRWRRILILSLLLLSVVTPIVFLSNRIKSITSVDRGEFIEEVSDIRYKTNDDLRLT
AFEQDGEGFKEPKRILKDDELNPVVRSSVSNKSHDGSQSSERDKTLGLSEISGGNSNKTK
EEQSLVSQQTNSSDTAEKISAKDIQASPKTKFQRPLAKSEKNSRAQLGRATDDRIKEIRD
KIIQAKAYLNLALPGNNSQIVKELRVRTKELERAVGDATKDKHLSKSSPQRLKAMELALY
KVSRVFHNCPAIATKLHAMTYKSEEQARAQKKQAAHLMHLAARTTPKGLHCLSMRLTTEY
FTLDHERAKPFQQSYINPDLYHYVVFSDNVLACAVVVNSTISSSKDPGKIVFHVVTDSLN
YPSISMWFILNPVSRATIQILNIDDMNVLPLDHAQLLMKQNSSDPRVISALNHARFYLPD
IFPGLNKIILFDHDVAVQRDLSSLWSLKMNGKVIGAVETCHEGEPSYIAMDTLINFSDAW
VAEKFDSKACTWAFGMNLFDLKEWRRQNLTSVYLNYFNQGVKRHLWKAGSLPLGWLTFFG
QAIPLEKRWNVVGLGHESGVKAGDIEEAAVIHYDGIMKPWLDIRIDKYKRYWNIHVAYHH
PYLQRCNIHD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatccgtcgctggcggaggattttgatcctctctctgctactgctatccgtc
gttactccgattgtcttcctctcgaatcggatcaagagcatcacttccgtcgatagagga
gagttcattgaagaagtgtctgacattaggtataagacgaatgatgatcttagactcacc
gcctttgaacaggatggagaaggcttcaaggagcctaaacgaattctgaaggatgatgag
ttgaatcctgtggttaggtctagtgtttctaataaaagtcatgatggttcgcagtctagt
gagcgagacaaaacacttggtctctcagaaattagtgggggaaacagtaacaaaacaaag
gaggagcagtcattagtttcacagcaaaccaatagctctgatacagcggagaaaatttca
gcaaaagatattcaagctagtcctaaaaccaagttccagcgccctttggctaagagtgaa
aagaattcaagggctcagcttggacgagcaacagatgataggataaaggagatcagagac
aaaatcatccaagctaaagcctatctgaatttggccctgcctgggaataactcccaaata
gtgaaggagttgagagttcgaacaaaagagctggaacgggctgtcggtgatgccaccaaa
gacaaacatttgtcaaagagctctcctcaaagattgaaagccatggaacttgcattatac
aaagtcagtcgggtctttcacaactgccctgccattgctaccaaactccatgccatgact
tataaatccgaagaacaagctcgggcgcagaagaagcaagcagcacatttaatgcacctt
gcagcaaggactaccccaaaaggacttcactgcctctcaatgcgtttgacaacagaatac
tttaccctggatcatgaaagagcaaagccttttcagcaaagttatatcaatcctgatctc
taccattacgttgtcttctctgacaatgttttggcctgtgcggttgttgttaactctaca
atttcctcgtcaaaggacccgggaaagatagtattccatgtggtgacggattcactcaat
tacccatcaatctcaatgtggtttattttaaacccagttagcagagcaacaatccaaatc
ctaaacattgatgatatgaatgtcctgcctctagaccatgctcaattgctgatgaagcaa
aactcaagtgatccgcgagtcatttcagcgctcaaccatgcacgcttctatctcccggat
atttttccaggtctgaacaagatcatattatttgaccatgatgtagcagttcagagagat
ctaagtagcctgtggagcctcaaaatgaatgggaaagttattggagctgtagagacttgt
cacgaaggtgaaccttcatatattgctatggacacactcataaacttctcagatgcatgg
gttgccgagaaatttgactctaaggcttgcacttgggcgtttgggatgaatctgtttgat
ctcaaagaatggagaagacagaatctgacatctgtgtacctgaactacttcaaccaggga
gtaaaaagacatctctggaaagcggggagcttgccactaggttggttgacattctttggg
caagcgataccattggagaagagatggaatgtggttgggttaggacacgaatcaggagtc
aaagcaggagacatcgaagaagcagcggttatacactacgacgggatcatgaagccatgg
ctggacatcaggatagacaaatacaagcggtactggaacatacatgtagcttaccatcac
ccatacttgcaacggtgcaacattcacgattga
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