Brassica rapa (field mustard): 103865242
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Entry
103865242 CDS
T03449
Name
(RefSeq) cellulose synthase-like protein D1
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
brp01003
]
103865242
Glycosyltransferases [BR:
brp01003
]
Polysaccharide
Structural polysaccharide
103865242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cellulose_synt
Glyco_trans_2_3
Glyco_tranf_2_3
MerT
Motif
Other DBs
NCBI-GeneID:
103865242
NCBI-ProteinID:
XP_009141287
UniProt:
A0A397ZN48
LinkDB
All DBs
Position
A04:complement(17426810..17432108)
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AA seq
1023 aa
AA seq
DB search
MASSPPKKTLNSQSSSISRPPQAVKFGRRTSSGRSVSLSRDDDMDVPGDSSSHTDYINYT
VHMPPTPDNQPAGSTSDAANRGGPRNKMERRLSVMKSNNKSMLLRSQTGDFDHNRWLFES
KGKYGIGNAFWSEEDDNYDGGVNMSDFLDKPWKPLTRKVQIPAKVLSPYRLLIVCRLVVL
FFFLWWRIANPNEDAMWLWGLSIVCELWFAFSWILDILPKLNPINRATDLDALHDKFEQP
SPSNPTGRSDLPGVDVFVSTADPDKEPPLVTANTLLSILAVDYPIEKLSAYISDDGGAIL
TFEAMAEAVRFAEYWVPFCRKHDIEPRNPDSYFSLKKDPTKNKKKHDFVKDRRWVKREYD
EFKVRINGLPEQIKKRAEQFNMREELKERRIAKEKNGGVLPPDGVEVVKATWMADGTHWP
GTWFEPKPDHSKGDHAGILQIMSKVPELEPVMGGPNEGALDFTGIDIRVPMFAYVSREKR
PGFDHNKKAGAMNGMVRASAILSNGAFILNLDCDHYIYNSKAIKEGMCFMMDRGGDRICY
IQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPVYVGTGCMFRRYALYGFNPPRAN
EYSGVFGQDKAPAMYGRTQSGASQNSQASDIESDTQPLTDDPDLGLPKKFGNSTVFTDTI
PVAEYQGRPLADHMSVKNGRPPGALLLPRPPLDAPTVAEAIAVISCWYEDNTEWGDRIGW
IYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFS
KNNAIFATRRLKFLQRVAYLNVGIYPFTSIFLVVYCFLPALCLFSGKFIVQSLDIHFLSY
LLCITITLTLISLLEVKWSGIGLEEWWRNEQFWLIGGTSAHLAAVVQGFLKVIAGIEISF
TLTSKSAGEDEDDVFADLYIVKWTGLFIMPLTIIVVNLVAIVIGASRTIYSVIPQWNKLL
GGTFFSMWVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISPPDDVTGGGG
ISV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagtccacccaaaaagactttaaactcacaatcctcgtccataagccggcct
ccacaggccgtcaagtttggtcgccggacgtccagtggccgcagtgtgagcctctcccgc
gatgatgacatggatgtccctggagactcctccagccacaccgattacatcaactacacc
gtccacatgcctccaacaccggacaaccaacccgctggctccacctctgatgcagcaaac
cgcggtggaccccggaacaagatggagaggagattatccgtcatgaaatcgaataacaag
tcaatgttgttgaggagccaaacgggagactttgatcataacaggtggttgtttgaatct
aaagggaagtacggaataggaaacgcgttctggtcggaagaggatgataactacgacggt
ggtgttaacatgtcggattttttagacaaaccatggaagcctctcaccagaaaagttcag
attccagccaaagttcttagtccttacaggttattaatagtatgtcgtcttgtggtactc
ttcttcttcctctggtggcgtattgcgaaccccaacgaggatgcaatgtggctatgggga
ctatctatagtttgcgagctttggttcgctttctcttggattcttgacattcttccaaag
ctaaaccctataaacagagctacagatctcgatgccttgcatgacaagtttgagcagcct
tctccttcaaaccctactggtcgctctgatcttcccggtgttgatgtgtttgtttccact
gctgacccggataaagaacctcctttagttaccgcgaacacccttctttcgatcctcgct
gtagattacccaatcgagaagctttcagcttacatttcagacgatggtggtgcaattctc
acctttgaagccatggctgaagctgttcgctttgctgagtattgggtgccattttgtaga
aaacatgacatagagcctagaaacccggatagttacttcagcctcaagaaagacccgaca
aagaacaagaaaaagcacgattttgtgaaagatcgtcgttgggtcaagcgtgagtatgat
gagttcaaggttaggatcaatggtcttccagaacaaatcaagaaaagagctgagcaattc
aacatgagggaagagcttaaggaaaggcgtattgccaaagaaaaaaatggcggtgtactg
ccacctgatggagttgaggttgtaaaagcaacatggatggctgatggtacacattggcca
gggacttggtttgaacctaaacctgatcattcgaaaggagaccatgccggaatcctacag
attatgagtaaagtgcctgagcttgaaccggtgatgggtggaccgaatgagggtgcattg
gacttcactgggatcgatatccgagtaccgatgtttgcttatgtatcacgtgagaaacgt
ccaggttttgaccataacaagaaagcaggtgcaatgaatggtatggttagagcttcagcc
atattatctaatggtgccttcatcctcaatttggattgtgatcactacatctacaactcc
aaagctattaaagaaggaatgtgtttcatgatggaccgaggtggtgatagaatatgttac
attcagtttccacaaaggttcgaaggaattgacccatctgatcggtatgcaaatcacaat
actgtcttctttgacggtaacatgagagcattagatggtttacaaggacccgtctatgtc
ggaacagggtgtatgttccgaaggtatgctctctatggattcaacccacctcgagcaaac
gagtactcaggcgtgtttggtcaagataaagcccctgctatgtatggccggactcagtcc
ggggcgtcccaaaattcccaagcatctgacatagagtccgatacacagcctcttaccgat
gatccagatcttggtctgcccaaaaagtttggtaactcgaccgtgttcacagacactatc
ccagttgcagagtaccaaggacggcctctagcagatcacatgtcagttaaaaacggaaga
ccgcccggtgctttgctcctgcctcgacctccccttgatgctccaaccgtagctgaagcc
attgctgtcatttcctgctggtatgaagacaatacagaatggggagatagaatcggatgg
atctacgggtcggtcactgaagacgtggtgacgggctatcgtatgcacaaccgtggttgg
cggtcggtttactgcatcacaaaacgtgacgctttccgtggcacagctccaataaatctc
actgaccgtctccaccaagtcctccgttgggccactggctcagtagagatcttcttctcc
aagaacaacgcgattttcgccaccagacggctcaagtttctccagcgagtcgcctacctc
aacgtcggtatataccctttcacctccatcttcttggtcgtctactgcttcctcccggct
ctctgtctcttctccggcaaattcatcgtccagagcctcgacattcacttcctctcctac
ctcctatgcatcaccatcaccttaactctaatctccctcctcgaggtcaaatggtcaggt
attggactcgaagaatggtggaggaacgaacagttttggctcataggaggcacgagcgct
catctggcagcagttgttcaagggtttctcaaagtgatagctggaatcgaaatctctttc
acattgacatctaagtccgcaggagaagacgaagacgacgtctttgcggatctttacatt
gtgaagtggacggggttgttcatcatgcctctaacgatcattgtagtgaacctcgttgcg
attgtgataggtgcttcgaggacgatatatagtgtgattccgcagtggaacaagttgcta
ggagggacgttctttagcatgtgggtattgactcatatgtatccgtttgctaaagggttg
atgggtcggagaggaaaggttccgaccattgtttatgtttggtcggggcttgtctcgatt
actgtctcgctgctttggatcacgatcagtcctccagatgatgttacaggcggtggagga
atatcagtgtaa
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