Brassica rapa (field mustard): 103865284
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Entry
103865284 CDS
T03449
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103865284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103865284
03036 Chromosome and associated proteins [BR:
brp03036
]
103865284
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103865284
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103865284
PBAF complex
103865284
GBAF(ncBAF) complex
103865284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
NEXCaM_BD
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
103865284
NCBI-ProteinID:
XP_009141332
UniProt:
M4DZB7
LinkDB
All DBs
Position
A04:17614360..17616999
Genome browser
AA seq
459 aa
AA seq
DB search
MATNAPIPGGSSEIPPVTPSRPIIPETPSEISASSNSLQPPPSSSDTDRIYIPSYSRWFS
WNEINECEVRSLPEFFDSRSSSKNPRVYLYLRNSIIKQYRDEHPNKINFTDVRRTLVGDV
VSIRRVFDFVDSWGLINYSSSASAKPLKWDDKEAVASEPPSTVKESAKRICNGCKSVCSV
ACFASEKYELTLCARCYVRGNYRVGINSSEFKRVELSEESKTGWSEKETLLLLEAVMHYG
DDWKKVASHVTGRTEKDCVSQFVKLPFGEQFAKDSDSEDALETFDQIKGSADHESEGRVK
DGSSSPDNKRMKLTPLADASNPIMAQAAFLSALAGTKVAEAAARAAVTALSDIDHEAGKN
AGGDPNGQEINGNDSERAVAEAKSLIEKEEKEVEGAIREIVEVEMMKIRDRIVHFEKLDL
EMERSRKQLEDMKNLLFTDQLNIFFHTRRSRKAEDRAEC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaacgctccaattcccggcggatccagcgaaattccccccgttactccctct
cgtccaatcatacccgaaacaccgtcggaaatctccgcatcttcgaactccctccaaccg
cctccttcctcttccgataccgatcgcatctacatacccagctactctcgttggttttca
tggaacgagatcaacgaatgcgaggtcaggtctctaccggagttcttcgattcgaggtcc
tcctcgaagaaccctagggtttacctctacttgaggaactcgatcattaagcagtacaga
gacgaacaccctaacaagattaacttcaccgacgttaggaggactctcgtcggtgacgtt
gtctctattcgccgcgtgtttgatttcgtagactcgtgggggcttatcaactactctagc
tccgcctctgctaagcctctcaagtgggacgataaggaggccgttgcttctgagcctccc
tcgacggttaaagaatctgctaagaggatctgtaatggatgcaaatctgtttgcagtgta
gcttgtttcgcctctgaaaagtatgagttgacattgtgtgcgagatgttatgttcgtggt
aactatcgtgttggtattaactcctcggagtttaagcgtgttgagcttagcgaggagtcg
aagacagggtggtctgagaaggagactttgctgctgctggaagctgttatgcactatgga
gatgattggaagaaggttgcatcgcatgttactggtaggaccgagaaggattgtgtttct
cagtttgttaagcttccgttcggggaacagtttgcgaaggactctgactctgaggatgct
ttggagacgtttgatcagatcaagggctctgctgatcatgagtctgaaggaagagttaaa
gatggttcgtcttctcccgataataagaggatgaagttgactcctcttgcagatgcaagc
aatccaattatggctcaggctgcttttctttcagctttggctggcacaaaagttgcagaa
gcagcagcacgagctgcagtgacagctctatctgatatagaccacgaagctggcaaaaac
gctggtggagacccaaacggacaagagatcaatggtaacgactcagagagagctgtggct
gaagctaaatctctgattgagaaggaggagaaagaggtagaaggagccatcagagagatt
gtagaagtagagatgatgaagattagagataggattgtacatttcgagaaattggatttg
gaaatggagagaagccggaaacagttggaggacatgaagaatctacttttcactgatcag
ttgaacatcttcttccacacaagaagatccaggaaagccgaagatagagcagagtgttag
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