KEGG   Brassica rapa (field mustard): 103865284
Entry
103865284         CDS       T03449                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3B
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103865284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brp03021]
    103865284
   03036 Chromosome and associated proteins [BR:brp03036]
    103865284
Transcription machinery [BR:brp03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103865284
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    103865284
   PBAF complex
    103865284
   GBAF(ncBAF) complex
    103865284
SSDB
Motif
Pfam: SWIRM Myb_DNA-binding Myb_DNA-bind_6 SWIRM-assoc_1 NEXCaM_BD Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 103865284
NCBI-ProteinID: XP_009141332
UniProt: M4DZB7
LinkDB
Position
A04:17614360..17616999
AA seq 459 aa
MATNAPIPGGSSEIPPVTPSRPIIPETPSEISASSNSLQPPPSSSDTDRIYIPSYSRWFS
WNEINECEVRSLPEFFDSRSSSKNPRVYLYLRNSIIKQYRDEHPNKINFTDVRRTLVGDV
VSIRRVFDFVDSWGLINYSSSASAKPLKWDDKEAVASEPPSTVKESAKRICNGCKSVCSV
ACFASEKYELTLCARCYVRGNYRVGINSSEFKRVELSEESKTGWSEKETLLLLEAVMHYG
DDWKKVASHVTGRTEKDCVSQFVKLPFGEQFAKDSDSEDALETFDQIKGSADHESEGRVK
DGSSSPDNKRMKLTPLADASNPIMAQAAFLSALAGTKVAEAAARAAVTALSDIDHEAGKN
AGGDPNGQEINGNDSERAVAEAKSLIEKEEKEVEGAIREIVEVEMMKIRDRIVHFEKLDL
EMERSRKQLEDMKNLLFTDQLNIFFHTRRSRKAEDRAEC
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggccacgaacgctccaattcccggcggatccagcgaaattccccccgttactccctct
cgtccaatcatacccgaaacaccgtcggaaatctccgcatcttcgaactccctccaaccg
cctccttcctcttccgataccgatcgcatctacatacccagctactctcgttggttttca
tggaacgagatcaacgaatgcgaggtcaggtctctaccggagttcttcgattcgaggtcc
tcctcgaagaaccctagggtttacctctacttgaggaactcgatcattaagcagtacaga
gacgaacaccctaacaagattaacttcaccgacgttaggaggactctcgtcggtgacgtt
gtctctattcgccgcgtgtttgatttcgtagactcgtgggggcttatcaactactctagc
tccgcctctgctaagcctctcaagtgggacgataaggaggccgttgcttctgagcctccc
tcgacggttaaagaatctgctaagaggatctgtaatggatgcaaatctgtttgcagtgta
gcttgtttcgcctctgaaaagtatgagttgacattgtgtgcgagatgttatgttcgtggt
aactatcgtgttggtattaactcctcggagtttaagcgtgttgagcttagcgaggagtcg
aagacagggtggtctgagaaggagactttgctgctgctggaagctgttatgcactatgga
gatgattggaagaaggttgcatcgcatgttactggtaggaccgagaaggattgtgtttct
cagtttgttaagcttccgttcggggaacagtttgcgaaggactctgactctgaggatgct
ttggagacgtttgatcagatcaagggctctgctgatcatgagtctgaaggaagagttaaa
gatggttcgtcttctcccgataataagaggatgaagttgactcctcttgcagatgcaagc
aatccaattatggctcaggctgcttttctttcagctttggctggcacaaaagttgcagaa
gcagcagcacgagctgcagtgacagctctatctgatatagaccacgaagctggcaaaaac
gctggtggagacccaaacggacaagagatcaatggtaacgactcagagagagctgtggct
gaagctaaatctctgattgagaaggaggagaaagaggtagaaggagccatcagagagatt
gtagaagtagagatgatgaagattagagataggattgtacatttcgagaaattggatttg
gaaatggagagaagccggaaacagttggaggacatgaagaatctacttttcactgatcag
ttgaacatcttcttccacacaagaagatccaggaaagccgaagatagagcagagtgttag

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