Brassica rapa (field mustard): 103865352
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Entry
103865352 CDS
T03449
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3 isoform X2
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103865352
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
103865352
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
103865352
NCBI-ProteinID:
XP_009141397
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Position
A04:complement(17931278..17935005)
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AA seq
597 aa
AA seq
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MGASEVLTDPSSLYDVGNGEYSDTYTMLTVRNALASVQNGESDRYEELVQSMQIIKGADH
AVWADLVTILNALSGSVACIDIIHHRKLLSSVFGMSLWDLKPHVMEALVGLLISLAATSG
KYLDSCLNMLIGHFIPPRWVIDRLSQRRVIDQKTDVLSQVHGAILKITLLVPLAPSRLLP
MLAQQMPKINKKDNVVVIYVENLFKLESSPIGQVGSSMIFMMVMERLRDLDLEIDWDDIL
QDDSSRGMFDMELEDAMNEGEENTSGGNVVFESLDKLMVISFDHLESCNLDGRLDQVFEK
LFGAFENFILNTYKSKVSQFLMFYACSLDPENCGVKFASKLMDIFLSSNKPRPTRMSAVA
YLASYLARGKFLPVSYVATMLKRLVDECADYCRTCNDDIRPEAHQIFYSGCQAIMYVLCF
RMRSILNVPLFRSQLRPLESILMHRLNPLMVCLPSVVAEFLKQAKAGGMFVVSDAFIFDD
LLESELSRAFGGPERLDTFFPFDSCLLKSSNSYISPNFIYWSMVRPTYEEDDDDEEDAEI
IVNGDEESDEEEEEGDLDYSMNKMSITPKHSFKNKMERDRLLKMPSMIRPSISPQSF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatcagaggttctaactgatccatcaagcctatacgatgtgggcaacggtgaa
tattctgacacgtatacaatgcttaccgtgagaaacgcacttgcatctgttcagaatgga
gaatcagaccgttacgaggagcttgttcagtctatgcagatcatcaaaggagctgatcat
gctgtgtgggcagatcttgtgactatcttgaacgctttatcaggctctgtagcttgcata
gatatcattcaccatcggaagcttctttcttcagtttttggaatgtcattgtgggatctc
aaacctcatgtcatggaggcattggtgggcttactcatatcactggctgctactagtgga
aagtatctggactcttgtctgaatatgctcataggccacttcattccaccgcgttgggtg
attgatagactttcgcagcgccgtgtaatcgaccagaagacagacgttctttcccaggtt
catggagccattctgaagatcactcttttggttcctcttgctccctcgagattgttgccc
atgctcgctcagcagatgcccaaaataaacaaaaaggacaatgtggtagtgatttatgtg
gagaatttattcaagttggagagcagcccaatcgggcaagttggtagcagcatgattttt
atgatggtgatggagaggttgagagatttggatctggagattgattgggatgatattcta
caagatgactctagtagaggcatgtttgatatggaacttgaagacgctatgaatgaagga
gaagagaatacgtctggtggaaatgtagtttttgagtctttggacaagttgatggtcata
tcttttgatcatcttgaatcatgtaatcttgatggtcgtttggatcaggtgtttgaaaag
ctcttcggggcatttgagaacttcattctgaatacatacaaatcaaaagtttcgcagttt
ctgatgttctatgcttgttcactggatcctgagaactgtggtgtgaaatttgcgagtaag
ctaatggacatttttctctccagcaacaagcctcgacctactaggatgagtgcggttgct
tatctagctagctacttggctcgtggaaagtttttgcctgtttcctatgtggccaccatg
ctaaaaaggttggtagatgagtgtgcggattattgtagaacttgcaatgatgatattagg
cctgaagcacatcagattttctactccggatgccaggcgatcatgtatgtgctttgcttc
aggatgagatcaatcctaaacgttcctctctttcgctcccagcttagaccattggagtca
attttaatgcacagactaaacccattgatggtatgccttccatccgtagttgcagagttc
cttaagcaagctaaagcaggtggcatgttcgtagtctcagacgccttcattttcgatgac
ctacttgagtctgagctctcccgtgcgtttggagggcctgagaggcttgatacattcttc
ccctttgactcttgcttgctgaaaagctctaacagctatatctccccgaatttcatctac
tggtcaatggtgagaccgacttatgaagaagatgatgatgatgaggaggatgctgagata
attgtgaacggagatgaggagagtgatgaagaggaggaggagggtgatcttgattactcc
atgaacaagatgtccataacgcctaagcactctttcaagaacaagatggaaagagacaga
cttctgaaaatgccttccatgatcagaccttccattagtcctcaatccttttga
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