Brassica rapa (field mustard): 103865386
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Entry
103865386 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04144
Endocytosis
brp04517
IgSF CAM signaling
brp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103865386
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103865386
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103865386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103865386
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
brp04812
]
103865386
Membrane trafficking [BR:
brp04131
]
Others
Actin-binding proteins
Arp2/3 complex
103865386
Cytoskeleton proteins [BR:
brp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
103865386
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
103865386
NCBI-ProteinID:
XP_009141431
LinkDB
All DBs
Position
A04:16453991..16456517
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AA seq
292 aa
AA seq
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MKLIWSHVKLVGLTAKDKQQLYFELRISSEFRVPSNLIIDRFWNRLEQENNWWVSKLIRK
RHESSVTNVAWHTNNILLATTSTDGKCRVFSTFIKGVDTKDSKAGSPAESKFGEVCFLWQ
ASSFXXFSHPLLYFVDDVGPSPLAQSFAFRDLPLRDVLFISEKMVISVGYDSNPMVFAAD
DTGICLFLNFSSNIRNLSLSVLFCLTRVFIVLCFQFSEAFTKFYGQSKATTANEASESSK
SRGSVHDNCINSIVSLSKAGSPQVMRFSTSGLDGKIAIWDLGNMQEELGHQF
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatttggtctcatgttaaattggtcggtcttacagcaaaagacaaacaacaa
ctctatttcgagctccggatctcatcggagttccgagttcccagcaatctcatcatcgat
cgtttctggaatagattggagcaagagaataactggtgggtcagcaaacttatccggaaa
cggcatgaatcttcagtcacaaatgttgcttggcatactaataatattcttctggcaacg
acgtctacagatggaaaatgtcgggtattttcaacattcatcaaaggagttgacacaaag
gattcaaaagcaggctcaccagcggaatctaaattcggggaggtttgttttctttggcag
gcttcctcgttttagtaattttctcaccctctcctttactttgttgatgacgttggccct
tctcctttagcccaaagctttgcatttcgagatttgcctcttcgtgatgtgctctttatt
tctgagaaaatggtgataagcgttggttatgacagcaacccaatggtatttgctgcagat
gatactggaatatgcttattcctgaacttttcctcaaacataagaaaccttagcttatct
gttctgttttgtctaacccgtgtgttcattgtgttatgttttcagttttcagaagccttt
acgaaattctacggtcagtcaaaggctacaacagccaatgaagcttctgagtcctctaaa
tcacgtggaagcgttcatgataactgcataaattccattgtatctcttagcaaagctggg
agtcctcaagtaatgcgattcagcacttcaggattagatggcaaaatagctatatgggat
ctagggaacatgcaagaagaacttggccatcagttttaa
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