Brassica rapa (field mustard): 103865657
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Entry
103865657 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: pyridoxal 5'-phosphate synthase subunit PDX1.1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00750
Vitamin B6 metabolism
brp01100
Metabolic pathways
brp01240
Biosynthesis of cofactors
Module
brp_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
103865657
Enzymes [BR:
brp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
103865657
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
TetR_C_27
NMO
Motif
Other DBs
NCBI-GeneID:
103865657
NCBI-ProteinID:
XP_009141727
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Position
A04:19142559..19144171
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AA seq
418 aa
AA seq
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MVVQHTQQYRKLSSTSADISLRDSTFYIDRMKSVVKLLVIQTLLLLPTLNSTVFHVLLHP
TPSDELTLTFFSQSDCLISIRASLHKYKSLIFLLSSTLSLNPRKMAESTGVVAVYGEGSM
TETKQQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGV
ARMSDXIKEIKHAVTIPVMAKARIGHFVEVQILESIGVDYVDESEVLTLADEDNHINKHN
FKIPFVCGCKNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVMGTIRLLRGMDXV
DDEVFAYAKKIVAPYELVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSRI
FKSGDPAKRAKAIVQAVTNYRDAAVLAEVSCGLGEAKVERFANRSSKPIREFKCFISV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttcaacatacacaacaatacaggaaactgagctccacatcagcagacatatct
cttcgggactctacattttacattgatagaatgaaatctgtggtcaaacttcttgttatc
caaacattacttctcctccctacactcaactccactgtattccacgtgctcctccatcct
acaccgtccgatgagcttactttgactttcttctcccaatcagattgcttaatctcaatt
cgcgcctcactccataaatacaaatctcttatcttccttctttcctccacactctctcta
aaccctagaaaaatggcggaatcaaccggagtggtggcggtttacggcgaaggatccatg
accgagacgaagcagcaatctcccttctccgtcaaggtcggcctcgctcagatgctccgc
ggcggcgtgatcatggacgtcgtcaacgccgagcaagcgcgaatcgccgaagaggccggc
gcctgcgccgtcatggctctcgagcgcgtccccgccgatatcagagcccaaggcggcgtc
gcgaggatgagcgatnngatcaaagagatcaaacatgccgttacgattccggtcatggcc
aaagctcggatcggccacttcgtggaggtgcagatcctcgagtccatcggagtcgattac
gtcgacgagagtgaagtcctcactctcgccgacgaggacaaccacatcaacaagcacaac
ttcaagatcccgttcgtttgcggatgcaagaacctcggggaagcgttgcggcggatccgc
gaaggagccgccatgataaggaccaaaggagaggccgggacggggaacgtcgtggaggcc
gttaggcacgtgaggagcgtgatgggaacgataaggttgctgagaggcatggattgagtt
gatgacgaggtgttcgcttacgcgaagaagatcgttgcgccttatgagttggttatgcag
acgaagcagctcgggagattaccagtggttcagttcgccgccgggggggttgcgacgccg
gcggacgcggcgctgatgatgcagctggggtgtgatggagtgtttgtcgggtcgaggatt
ttcaagagtggagatccagcgaagcgtgcgaaggcgatcgtgcaggcggttacgaattat
agagacgcggcggtgctggcggaggtgagctgtgggttgggtgaagctaaggttgagagg
ttcgcgaaccggtctagtaaaccaatcagagaatttaaatgttttatttcggtttaa
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