Brassica rapa (field mustard): 103865831
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Entry
103865831 CDS
T03449
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103865831
Transcription machinery [BR:
brp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
103865831
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Response_reg_2
GerE
WD40_Prp19
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
103865831
NCBI-ProteinID:
XP_009141935
LinkDB
All DBs
Position
A09:3639339..3642688
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AA seq
501 aa
AA seq
DB search
MGVVFISSSAARSPLRLNTDLLTHRSTLKKLPSIVAFKADESTNSSLIVPREQEKQKEKR
VVTRRKPCKDQNLPPLGLDYNEAAARLESIYKLSPPATSLEEDVIDASKGKVSRRRKRKE
SGGGEEKKVVVRSNVKKEKRLNLDKRIALKRNVQEKPVIIASAQKKVTRRQQEEEKIERL
VRDYSASNDVVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKALLEVKDELQKSLGREAREA
EIAREINMSLAEVKMKIKVGKAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGM
RGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKAKMEL
LFELGRLPTEEEVVERLKISPERYREVLRAAKPVYSLNTKHSVTQEEFINGITDVDGVGA
DNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE
VKALMKLKHQARVDYLRQYII
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtttatttcaagctcagctgcaagatctcctctccggttaaacaccgat
cttttaacacaccggtccacactcaaaaagctgccatccatcgttgctttcaaagcagat
gagtccaccaactcatctttgatcgttcctcgtgagcaagagaagcaaaaggagaagaga
gttgtaactaggagaaagccctgtaaagaccagaacttgcctcctttagggttagattac
aatgaagctgctgcaagactagaaagcatttacaagcttagccctcctgcaacatcccta
gaggaggatgttattgatgcttctaaagggaaagtttcacggaggaggaagaggaaagag
agtggcggcggcgaagagaagaaagtagttgtgaggagtaatgtgaagaaggaaaagaga
ctgaatcttgataaacggattgcgttgaagagaaacgttcaagagaaaccagttattatt
gcctctgctcagaagaaagtaacaaggaggcagcaagaggaggagaagatcgagaggctc
gtgagagactactcggcttctaatgatgtagtcagcttggactggaagaaaatgaagata
cctcctgttctttcttccactgaacatacttggttgtttaagttgatgcaacctatgaag
gctcttcttgaagtgaaagatgaactgcaaaagagtctgggaagagaggctagggaagct
gaaatagctagagagatcaatatgagcctggctgaagtgaaaatgaaaatcaaagttggt
aaagctgcaaggaacaaacttattaagcacaatctccgccttgtcttgtttgttatgaac
aaatactttcaagacttcactaacggaccaaagttccaagacctctgtcaagccggtatg
agagggcttatcacagctattgaccggtttgaaccaaaaagaaagttccgtctttccact
tatggtttgttttggattagacatgccatcatacggtctatgacaacctcaaacttcact
cgtgtcccatttggacttgaatcggttagagtggagatctataaagcaaagatggagcta
ttgttcgagctgggaagactacctacagaggaagaggttgttgagagactaaagatatca
cctgagagataccgtgaagtcttgagagctgcaaaaccggtttactcactgaacacaaaa
cattcggttactcaagaagagttcatcaatggaatcacggatgttgatggtgtaggagct
gataacagaagacaacctgctcttctcaggctagctcttgacgatgtgctggattcattg
aagcctaaagagagtctggttattcgacaaagatacggtcttgatgggaaaggagacagg
acactaggagagatagctggaaatctcaacatctccagagaaatggtgaggaaacatgaa
gtcaaggccttgatgaagctcaagcatcaagctcgagttgattacctccgtcaatacatc
atctga
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