Brassica rapa (field mustard): 103865844
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Entry
103865844 CDS
T03449
Name
(RefSeq) autophagy-related protein 18c isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103865844
Membrane trafficking [BR:
brp04131
]
Autophagy
Other autophagy associated proteins
Others
103865844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
BCAS3_WD40
WDR55
Beta-prop_Vps41
Beta-prop_IFT140_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
NBCH_WD40
Beta-prop_EML
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
103865844
NCBI-ProteinID:
XP_009141942
UniProt:
M4DKD9
LinkDB
All DBs
Position
A04:20130567..20137082
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AA seq
408 aa
AA seq
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MSSTASSPQRVLQPGGYNGNDSRSSSTSSSFLRPELESTETEEAELVSVSWNQDSSCFAA
GTSHGFRIYNCEPFKETFRRDLKNGGFKIVEMLFRSNILALVGGGPNSQYPSTKVLIWDD
HQSRCISEFSFRSEIRAVKLSRDWIVVVLEHKIYVYSFVDLRLLLQIETHANPRGLCCLS
HHSDTSVLACPGLLRGEIRVEHFGLNMVQTINAHDASIACMTLTLDGLLLATASTKGTLI
RIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVVGEDSQS
SENAALLTQGTYSNSLQGLVSPATGTNPGSSLSFMRGVLPKYFSSEWSFAQFHVSEVTQF
FAAFGSHNTVAITGMDGSFYRCSFDPVNGGEMVQQEYICFLKTDNPPR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaactgcttcaagtccccaaagagtcctgcaaccaggtggttataatggtaat
gactctcgaagtagcagcacttctagttcctttctgcgtccagagttagaatcaactgaa
accgaagaagcagagctagtttctgtgtcttggaaccaggactccagttgtttcgctgct
ggaacaagtcatggtttccgcatatacaactgtgagcctttcaaagaaactttcagacgc
gacctgaagaacggtggtttcaaaatcgttgagatgcttttccggagcaacatcttggcc
cttgttggcggtggacctaactctcagtacccttcgaccaaagtcctgatctgggatgat
caccagagccgctgcatcagtgaattttcttttaggtctgagattcgtgcggtgaagtta
agtagggattggattgttgttgttcttgagcataagatatatgtctacagtttcgtggac
ctgaggcttcttcttcagattgaaactcacgcgaatccgagaggattgtgctgcctttct
catcactcggatacatctgtcttggcttgccctggtttacttcgaggagagattcgagtt
gagcattttgggcttaacatggtgcaaaccataaatgcgcatgacgctagtattgcgtgc
atgaccttgacgcttgatggtctgttgctggcaactgctagtacaaaggggacactgatt
agaatcttcaacacaatggacggaactcgtttgcaagaggtaagaagaggagtggacaga
gcagatatttatagcattgcactttcaccaaacgtgcagtggctggcagtatcaagcgac
aaggggactgttcatattttctctcttagagttagggtagttggggaggattctcaatcc
agtgaaaatgcagctctcctgacacaaggaacttattctaattctctgcaaggccttgtt
tctccagccactggtaccaatcccggttcatcattgtcttttatgagaggtgttctacca
aagtatttcagctcggagtggtcatttgcacagttccatgtatcagaagtcacacaattc
ttcgctgcatttggcagtcacaacacagttgctatcaccggcatggatggaagtttctac
agatgcagctttgatcctgtgaatgggggagagatggtgcagcaagaatatatctgcttt
ctaaagacagataaccccccaagataa
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