Brassica rapa (field mustard): 103865894
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Entry
103865894 CDS
T03449
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103865894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103865894
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103865894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
103865894
NCBI-ProteinID:
XP_009142001
UniProt:
M4DK95
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Position
A04:complement(20356217..20360888)
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AA seq
863 aa
AA seq
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MANDQEMSGWTDLLHSSSKLLEQAAPSSQFPPLQRNLDQLEALSKKLKAKTLRNEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNVRSFNDYMMKVLEEDWRKEKRDFLQSLSRISMLPKTNMIDASREANAGQLVPVASS
SRVSSSTLGKELVALANIPIHEKKAYVYGEVVKKLNMSRERGLPFKPAMSFKEAYESLGA
EGTHGKSVNVQKIWQLVQAITGEDSAVRQGVSKRMSLAIGARRHLERGHEKHIMDTIQSH
PTQAALGGSVGNLQRIRAFLRIRLREYGVLDFDSPDARRQPPVDTTWQQIYFCLRTGYYE
EAKEIARSTRSSQQFAPLLTEWITKDGMVAAETAAIASEECEKMLRMGDRLGRTAYDKKK
LLLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLACIKDVSGASSSSVVLNDGLAPYS
LDDLQTYLNKFEPSYYTKNGKDPLVYPYVLLLSVQLLPAIIHLSKEAGEGGCNIDAVHIA
ISLVDHSVLSEGSGTGHKLSVMDANAEASSMVRQYGSMFLHHGDLQMTVEYYAQAAVTVG
GGQLAWSGRSNTDQQRQRNLMLKQLLTEILLREGGIYFLLGGRGSGEEGQLGRFFPDSRL
RQQFLIEAAHQCQEAGLYDKSIEIQKRVGAFASALETINKCLSEAICSLARGRLDGERRT
SGLILAGNDILQTYKYYPEVSLQEGERVMEQETILRELEAILSIHKLARQGNHMDALREI
AKLPFLNLDPRVPDATADVFQSASPYFQTCVPDLLKVALTCLDNVPDPDGSIRAMRSKIA
GFLASNTHRNWPRDLYEKVARSF
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccaagagatgagtggctggaccgatcttctccactcctcttcgaagctt
ctcgagcaagccgctccttcctctcagtttcctcctcttcagaggaacttggatcagctg
gaagcgttatcgaagaagcttaaggctaaaacgctaaggaacgaagctccttctcagtct
attgccgccactagactacttgctcgggagggaatcaatgctgagcagctagctcgtgat
cttaagtcttttgagttgaagacaacgtttgaggatgtgttccccgctgaggctactagc
gttgaagaatacctacaacaggtgcatgaaatggctatggtatcagctatacaggaagct
cagaaggataacgttagaagctttaatgactacatgatgaaagtgctggaggaggattgg
agaaaagaaaaacgcgacttccttcaaagccttagcagaatatcaatgttacctaaaacg
aatatgattgatgcaagcagagaagctaatgccggtcaattagtcccggtggcttcgagt
tctcgagtgtcatcgtccacattaggcaaagaacttgtggctctggctaatattcccatt
catgagaaaaaagcatacgtctatggagaggttgtgaagaaacttaacatgtcaagagaa
cgaggcttgccatttaaacccgcaatgtcttttaaggaagcttatgaatctcttggtgct
gagggaactcatggaaaatcagtcaacgtccagaaaatatggcagcttgttcaggcaata
acaggtgaagactcagcagttcgacagggtgtttcgaagaggatgtccctcgcgataggt
gcaagacgtcatttagaacgtgggcatgagaaacatataatggacacaattcaaagtcac
cctacacaagctgctcttggtggatctgttggaaatttgcaaagaattcgtgctttcctt
cggattcgtttgagagaatatggggttttagattttgattctcctgatgcacgtaggcag
cctcctgttgatacgacctggcaacagatatatttttgcttacgtactgggtattatgag
gaggctaaagaaattgctcggtcaactcggtcatctcaacaatttgcaccactgcttaca
gagtggattacaaaggatggtatggtggctgcagagactgcagctattgcgtcagaagaa
tgcgagaaaatgctgagaatgggtgatcggctgggcagaaccgcatatgacaagaagaaa
ctcctactctacaccatcatctctggttcccgcaggcaaatcgagcgcatactgagagat
ctgtctacactcttcaacaccatcgaagatttcctatggttcaaattagcatgcatcaaa
gacgtttctggtgcatcttcttcatctgtggtcttgaacgatggcctggcgccgtacagt
ttagacgatctccagacctatctcaataaattcgagccttcatactacacaaagaacgga
aaagaccccttggtgtatccatacgtgttgcttctcagcgttcagctgcttccagctatc
attcacttatccaaagaagcaggagagggagggtgtaacatcgatgctgttcatatagct
atctctctagtggaccattctgttttatccgaaggctccgggacaggacacaaactcagc
gtgatggatgctaatgcagaggcatctagtatggttaggcaatacgggtccatgtttctg
catcacggggatctccagatgacggtagagtattacgcgcaagctgctgttactgtaggt
gggggacagctagcttggtccggaagaagtaacacagatcaacagaggcagagaaactta
atgctgaagcagctattgactgagattctcctgcgagagggtggtatctacttcttgctt
ggcggaagaggctctggcgaagaaggtcagcttggaaggttcttcccggactctagattg
agacagcagttcttgatcgaagctgcacatcaatgtcaggaagctggattgtacgacaaa
tccatagagatacagaagagagtgggtgcttttgcatctgccttggagactataaacaag
tgtctctctgaagccatctgctccctggcacgtggaagattagatggtgaacgcagaaca
tcaggtcttattctagcaggaaacgatattctccagacttacaaatattaccctgaagtc
agtcttcaggaaggagagcgagtgatggaacaagaaacgatactaagagagctggaggca
atactatcgatccacaagttggctagacaaggcaaccatatggatgctctgagggaaatt
gcgaaacttccgttccttaatcttgatccaagagtgccagatgcaaccgctgacgtgttc
cagagtgcgtctccttacttccagacttgtgtcccggacctgctcaaagttgcgctgact
tgtctggacaatgtacctgatcctgatggatcaatccgtgctatgagatccaagatcgct
gggtttcttgcaagcaacacgcacaggaactggcctcgtgacttgtacgagaaggtggct
cgaagcttttga
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