Brassica rapa (field mustard): 103865942
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Entry
103865942 CDS
T03449
Name
(RefSeq) RING-H2 finger protein ATL40
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103865942
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103865942
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
103865942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
Prok-RING_4
DUF2417
zf-RING_6
Prok-RING_1
zf-Nse
zf-RING_4
Orf78
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
103865942
NCBI-ProteinID:
XP_033145671
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Position
A04:20539491..20542477
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AA seq
192 aa
AA seq
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MSSDNRDHFDRSFWQNTSSYDGSSKILLLTIISFSTIILIVFVYHLYARFILHRRRSTFQ
GLSLSVVSQPPIRGLDKLVIASLPTFVVGVNGGDVSATECAVCLSLLEEKDTARMLPNCK
HVFHVTCIDTWLTTCSTCPVCRTEVEPSQRLVPEPREGPVVDGASPLDLTAASSSNNKTR
VDQDRVMDLERQ
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagacaaccgagatcatttcgaccgttccttctggcaaaacacgagttcttac
gatggaagcagcaagatcttactcctcaccatcatttctttctctaccattattctcatc
gtttttgtgtatcatctttacgctagattcatcctccaccgccgtagatcaaccttccaa
ggcctctccctctccgtcgtgtctcagccgcccatacgtggtctcgacaaacttgtcatt
gcatctctccctacattcgttgttggagtcaatggtggtgacgtctcagccacggaatgt
gcggtgtgtctaagcttgttggaggagaaagatacggcgaggatgttaccgaactgcaag
catgttttccatgtgacatgcattgatacatggctcaccacgtgttccacttgtcccgtt
tgtcgaactgaagtcgagccgagtcaaaggctagtgcctgagccaagagaaggaccagtt
gttgacggtgcatctccgttagatttaacagcggcatcttcgtcgaataacaaaactcgt
gttgaccaagatcgtgtaatggacctagaaagacaatga
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