Brassica rapa (field mustard): 103866362
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Entry
103866362 CDS
T03449
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103866362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103866362
Spliceosome [BR:
brp03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
103866362
Complex B
103866362
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Calcipressin
DUF4523
xRRM
RRM_3
Adhesin_P1_N
Motif
Other DBs
NCBI-GeneID:
103866362
NCBI-ProteinID:
XP_009142518
UniProt:
M4CJR1
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All DBs
Position
A05:complement(195724..197176)
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AA seq
258 aa
AA seq
DB search
MEMMQQEEVAAAAAAANKAGSEVTQNQTIYINNLNEKIKLEEVKKSLKEVFSAYGKIVEV
LAFKTLKHKGQAWVVFDNPESASNAISKMNGYPFYNKPMRIQFAKTKSDVIAKADGTFVP
REKRKRHEEKGGKKKKEQHHDSTRVAMPAYPGVYGSAPPLSQVPYSGGGGGVKSNLPEAP
APPNNILFVQHLPHDTTPEILQNLFDKYHGFKEVRMVAAKPGIAFVEFADEMQSTVAMHG
LEGFTIQQTPMRITYAKK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggagatgatgcagcaggaggaggtggcggcggcggcggcagcagctaataaggctgga
tcggaggtaactcaaaaccagacgatttacatcaataatctcaacgaaaaaattaagctc
gaggaggtgaagaagtcgctgaaggaagtgttctcagcgtacggaaagatagtggaggtg
ttggcgtttaagacattgaagcacaaaggacaagcttgggttgtgttcgacaatcccgaa
tctgcttccaatgctatctccaagatgaatggataccccttctacaacaaacccatgaga
atacaatttgcaaaaacaaaatcagatgttatcgccaaggccgatggtacttttgttcct
cgcgagaaacgaaagcgacacgaggagaaaggtggtaagaaaaagaaagagcagcaccat
gattctacacgtgtggccatgccagcatatcctggtgtctatggatctgcacctcctctt
tcccaagtaccatactctggtggtggtggtggtgtgaaaagcaatcttccggaggcgccg
gcacccccaaacaacatcctctttgtccaacaccttcctcacgacaccactcctgagatt
cttcagaatctcttcgacaagtaccatggcttcaaggaggttaggatggttgcagccaag
cctggtattgcctttgttgagtttgctgatgagatgcagtctacggttgccatgcacgga
ctggaaggtttcaccattcagcaaacccctatgcgcatcacctatgctaagaaataa
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