Brassica rapa (field mustard): 103866392
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Entry
103866392 CDS
T03449
Name
(RefSeq) long chain acyl-CoA synthetase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00061
Fatty acid biosynthesis
brp00071
Fatty acid degradation
brp01100
Metabolic pathways
brp01212
Fatty acid metabolism
brp04146
Peroxisome
Module
brp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
103866392
00071 Fatty acid degradation
103866392
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103866392
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
brp01004
]
103866392
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103866392
Enzymes [BR:
brp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
103866392
Lipid biosynthesis proteins [BR:
brp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
103866392
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of breast milk
103866392
Exosomal proteins of breast cancer cells
103866392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
103866392
NCBI-ProteinID:
XP_009142549
LinkDB
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Position
A05:complement(359678..365083)
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AA seq
662 aa
AA seq
DB search
MRMKSFAAKVEEGVKGENGKPSVGPVYRNLLSEKGFPPIDSDITTAWDIFCKSVEKFPGN
KMLGWRPIVDKKVGPYVWKTYKEAYEEVLQIGSALRALGAEPGCRVGIYGINCPQWIIAM
EACAAHTLICVPLYDTLGSGAVDYIVDHAEIDFVFVQDTKIKGLLEPDSICSKRLKAIVS
FTNVSKEDSIKASEIGVKTYSWLDFLHMGREKPEEISPPKPFNTCTIMYTSGTSGDPKGV
VLTHEAVATFVVGVDLFMDQFEDKMTHEDVYLSFLPLAHILDRMNEEYFFRKGASVGYYH
GDLNVLRDDIQELKPTYLAGVPRVFERIHEGIQKALQELNPRRRFIFNALYKHKLSWLNR
GYSHSKASPMADLIAFRKIRDKLGGRIRLLISGGAPLSPEIEEFLRVTCCCFVLQGYGLT
ETLGGTALCVPDEMCMLGTVGIPAVYNEIRLEEVAEMGYDPLGENPAGEICIKGKCLFSG
YYKNPELTDEVLKDGWFHTGDIGEIQPNGVLKIIDRKKNLIKLSQGEYVALENLENIYGQ
NSLVQEIWVYGDSFKSMLVAVIVPNPEVVNRWAKDLGLNKPFEELCSLTELQEHIILELK
STAEKNKLKRFEYIKAVTVEIKPFDLERDLVTATLKNKRNNLLKYYQVQVDEMYRKLASK
KI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgaagtctttcgcggcaaaggtggaagaaggagtcaaaggggaaaacgggaag
ccgtcagtaggtccggtgtaccggaatcttttgtcggaaaaagggtttcctccaatagat
tctgatatcaccactgcttgggacatattctgtaaatctgtggagaaattccctggcaac
aagatgcttggatggcgtccaatcgtagataagaaggttggaccgtatgtgtggaaaacg
tacaaggaagcatatgaagaagttctgcagattggctctgcattacgtgctctcggagct
gagcctgggtgtcgagtgggaatctatggaattaattgtcctcagtggatcatagcaatg
gaggcttgtgcagctcacactctaatctgtgtacctctatatgatacattgggttctgga
gccgtggattatatcgttgatcacgcggaaatcgattttgtattcgtccaagacaccaag
attaaagggcttcttgagccagattccatatgttctaaacggctaaaagctatagtttcc
ttcactaatgtgagcaaagaagatagcatcaaggcttcagaaattggagtcaaaacgtac
tcttggctcgattttcttcatatgggacgtgagaaaccggaagagattagtccacctaaa
ccatttaacacatgcaccataatgtacacaagcggcacgagtggtgaccctaaaggtgtg
gttttgactcacgaagcggtggcgactttcgttgttggggtggatctcttcatggaccag
ttcgaagacaagatgacacatgaagatgtgtatctctccttcttgccgctggctcatatt
cttgaccgtatgaatgaggaatacttctttcgcaaaggggcttccgttggctattaccat
ggagatttgaatgtgttacgtgatgacattcaagaattgaaaccaacttatctagctgga
gttccaagagtgttcgagagaattcacgagggtattcaaaaggctcttcaggaacttaac
cctagaaggagatttatcttcaatgctctctacaaacacaagctttcatggttgaatcgt
ggatactcgcatagcaaagcttcacccatggctgatttaattgctttcagaaagattaga
gacaaattgggaggtcgaatccggttgctaatatctggaggagcacctttgagccctgag
attgaagagttcttgagagttacttgttgttgctttgtcctccaaggctacggtctgacg
gagacgcttggaggaacggctttgtgtgtaccggatgagatgtgtatgttagggacagtc
ggtataccggcggtttacaacgagataaggcttgaggaggtggctgaaatgggctacgac
ccactcggtgaaaatccagcaggcgagatctgtataaaaggaaaatgtttgttttctggg
tattacaagaaccccgagcttactgatgaagtcttgaaagacggatggttccatacagga
gatataggtgagattcaaccaaatggggtgctcaagataattgatcgtaaaaagaattta
attaaactttctcaaggagagtacgttgctcttgagaacttggaaaacatctacggtcaa
aactctcttgtccaagagatatgggtttatggagacagcttcaaatcaatgcttgtcgcg
gtgattgttccaaaccctgaagtcgtgaaccggtgggctaaagatctcggtttaaataaa
ccattcgaagaactatgttctctcacggagttgcaagaacacatcattttagaactgaag
tccacggcagagaagaacaagctaaaaaggtttgagtacatcaaagcagtgacggtggag
ataaaacctttcgacttagagagagacttggtgactgcgacgctcaagaataagaggaac
aatcttctcaagtattatcaggtacaagtcgacgagatgtaccgaaaattggcgtccaag
aaaatctga
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