Brassica rapa (field mustard): 103866468
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Entry
103866468 CDS
T03449
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 3
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103866468
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103866468
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103866468
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103866468
NCBI-ProteinID:
XP_033148408
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Position
A05:complement(841613..845013)
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AA seq
704 aa
AA seq
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MEMMNLKRNTFVKFTENEDSWNRPSVTSVIKKTVRRSFEKGSEKIRTFKQQPLTFHSQKK
NENKKKIIRVMNPNDSYLQNWNKIFLLLCVVALAFDPLFFFIPVVDPDRFCLKLDKKLEA
VACVFRTFIDAFYLVHMLFQFNTGFIAPSSRGFGRGELVQSSKKIAVRYLKSYFIIDVLS
ILPIPQVVVLAVVPSMSRPASLVTKELLKWAIFCQYVPRIARIYPLFKEVTRTSGLVTET
AWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWRETCAKIEGCVHGNLYCSGGEDNSQ
YLIGSCPLMDPEEIKNSTVFNFGIFAEALQSGVVESMNFPKKFFYCFWWGLRNLSAVGQN
LKTSDFEGEIIFAIIICISGLVLFALLIGNMQKYLQSTTVRIEEMRVKRRDAEQWMSHRM
LPDDLRKRVREYEQYKWQETRGVEEEALLSSLPKDLRKEIKRHLCLNLLKKVPWFKAMDD
RLLDALCARLNTVLYTENSYIVREGEPVEDMVFIMRGKLISTTTYGGQTGFFNIAHLEAG
DFCGDLLTWALDPNTSHLPISTRTVQAETEVEGFVLSAEDLKFFSTQYRRLHSKQLRHTY
RCYSVQWQTWAACFIQAAWKRYCRRKLSRVLREEEERLQNTLQTTDDSGGNKLNLGAAIY
ASRFASHALRNVRANAAARSSMLPHMLSLLPQKPADPEFPMDET
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagatgatgaatctcaaaagaaacacgtttgtaaagtttactgaaaatgaagattct
tggaacagaccttcagtaacttcagttattaaaaaaacagttagacgtagctttgagaaa
ggctcagagaagatcagaacctttaagcagcagccattaacgtttcattctcaaaagaag
aatgagaacaagaaaaagataatacgagtgatgaatcctaacgactcttatcttcaaaac
tggaacaagattttcttgctcctttgtgttgtagcgttagcatttgatcctctttttttc
ttcatccccgtggtggatccagacagattctgtcttaaactagacaagaaactcgaggca
gtggcttgtgttttccgcactttcatcgacgctttctatttggttcacatgttgtttcag
tttaatactggcttcattgctccttcttctcgtggttttggaagaggagagcttgttcag
agttctaaaaaaatcgctgtgagatacctcaagtcatactttataatcgatgttctttct
attctccctattcctcaggtagttgttctagctgttgttccatcgatgagtcgacctgcg
tcactggtaacaaaagagctattgaaatgggcaatattttgtcagtatgttccgaggatt
gcacgaatctatccgctttttaaagaagtaacaagaacgtccggtttggtaactgagact
gcatgggctggagctgctttaaacctattcctctacatgttagctagccatgtctttgga
tctttttggtacttgatatcgattgaaaggaaagatagatgttggcgtgaaacatgtgct
aaaatagaaggatgtgttcatgggaacttatactgttcgggtggggaagacaatagccag
tatctaataggttcttgcccgttgatggacccagaggagataaaaaactcgacggttttc
aactttggtatattcgctgaagcattgcagtctggagttgtggagtcaatgaacttccct
aaaaagtttttctattgtttctggtggggtcttcgcaatcttagtgctgtggggcaaaac
ttgaagacaagtgactttgaaggagagatcattttcgcgatcatcatttgtatctctgga
ctagttttgtttgctcttctcataggaaacatgcagaaatatttgcaatcaactacggta
agaattgaggaaatgagggtgaaaaggagagatgcagagcaatggatgtctcaccgtatg
ttgccagatgatctgagaaaacgtgtacgtgaatacgaacagtataaatggcaagaaacc
agaggagttgaggaagaagctcttctctctagtcttccgaaagatcttagaaaggaaatt
aaacgccatctttgtttgaatctcctcaaaaaggtgccgtggtttaaagccatggatgat
cggctactagacgcactttgtgcacgtttgaatacagttctttacacggagaacagttac
attgtgcgtgaaggtgaaccggtcgaggatatggtgtttataatgagaggaaaacttata
agtacaactacttatggtggccaaaccggattcttcaatattgctcatttggaagctggt
gatttctgtggagatcttctcacttgggcactggatcctaacacctctcacttacctatc
tctactagaaccgttcaagctgagacagaagtcgaaggctttgtcctctcagctgaagat
ctcaaattcttctctacacagtaccgtcgcctccatagcaagcagctacgacacacgtac
aggtgttattcagtgcagtggcagacatgggcagcatgttttatacaagcagcatggaag
agatactgtagaaggaagctctcaagggttttacgtgaagaagaagaaagactacaaaac
actcttcagaccaccgatgattcaggaggcaacaaacttaacttaggtgctgcgatttat
gcgtctaggtttgcttctcatgctctgaggaatgtaagggctaatgcagctgcacgcagc
tctatgcttcctcatatgctatctttgttgcctcagaaaccagctgatcctgagtttcct
atggatgaaacctaa
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