Brassica rapa (field mustard): 103866539
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Entry
103866539 CDS
T03449
Name
(RefSeq) amino acid transporter AVT1A
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103866539
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brp02000
]
103866539
Transporters [BR:
brp02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
103866539
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Paralog
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Motif
Pfam:
Aa_trans
DUF8641
DUF6556
Motif
Other DBs
NCBI-GeneID:
103866539
NCBI-ProteinID:
XP_009142730
UniProt:
A0A397ZCG7
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Position
A05:complement(1183443..1186478)
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AA seq
529 aa
AA seq
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MEKKPEFTFDDDEDSSKYENDSETDRSDVADLPGDDDNNNNDEDTFVSQVQWPQSFRETT
DSYTIAASPIFGSLRSNPSFYNTSQKPSFYRQSRSNLDVESKAPFLPERNEESDKASAAQ
SVWSRRGSFAEELAIGGYGCSLTQTIFNAINVMAGVGLLSTPYTLKESGWAGMVILVLFA
VICCYTATLMKECFENKTGIITYPDIGEAAFGISGRILICVLLYTELYSYCVEFIILEGD
NLTGLFPGTSLDWLGIHIDSQHLFGILTALIVLPTVWLKDLRIISYLSAGGVLASVLIAL
STFFLGATSGIGFHHTGHAVKWNGVPFAIGIYGFCYSGHSVFPNIYQSMADKTKFTKAVI
ITFALCVLLYGGVGIMGYLMFGEATLSQITLNMPKDLFFSKVAQWTTVASPFTKFALLMN
PLARGIEELLPEGMPENIWCFLLLRTALVASSVCAAFLIPFFGLVMALIGSILSILVAII
MPALCFMRIMGNKATRTQIILSWIIVAIGLVSGTLGTYSSVAKIIKNYE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaccagagtttacgttcgacgacgatgaagacagcagcaaatacgagaac
gacagcgaaactgatcgtagcgatgtcgcagatcttcctggtgacgatgacaacaacaac
aacgacgaggatactttcgtttcccaggttcaatggcctcagagctttagggaaacgact
gattcgtacacgatagctgcatcaccaatcttcggatctctaaggagcaatccgagtttc
tacaatacgagtcaaaagccgagtttctacagacagagcagaagtaatcttgatgttgag
tctaaagctcctttcctccctgagaggaacgaagaatccgacaaagcctcagctgcacaa
tctgtttggtctcgcagaggctcatttgctgaagagttagccattggaggctacggctgc
agcttaactcaaaccattttcaatgcgattaatgtaatggctggagttggacttctctca
acaccttatacactgaaagaatctggttgggcggggatggtgattcttgtcttgtttgct
gttatatgttgttacactgctactttgatgaaagagtgtttcgagaacaagactggcatc
atcacttatcctgatattggagaagcagctttcgggatatctggtcgtattctcatatgt
gtgctattgtacacagaactatattcatattgtgtggagttcatcatcttggaaggtgat
aacctgaccgggcttttccctggtacatcactggattggctcggtatccatatcgactct
caacatttatttggaatcttgactgctctcattgttcttccaactgtttggctgaaggat
cttcgcatcatctcctacctctcagctggtggagttcttgcaagtgtgttgatagcattg
agcacgtttttcctcggagcaacgagcgggatcgggtttcatcacactggtcatgctgtg
aaatggaatggagtaccgtttgctattggtatctatggattttgctactcaggccactct
gtgttcccaaatatatatcagtccatggctgataaaaccaaattcaccaaagcagtgatc
ataactttcgctttatgtgttttgttgtatggaggagttggaatcatgggttatctcatg
tttggtgaagccactttatctcagattacactaaacatgccaaaggacttgttcttttcc
aaagtggctcaatggacaacggtagcgagtccgtttacaaaattcgctcttctgatgaac
ccactagctaggggtatagaagaattattaccagaaggaatgccagagaacatatggtgc
tttcttcttctaagaacagcactggtcgcttcttccgtttgtgctgctttccttattcca
ttttttggtcttgtgatggctctgataggatctatacttagtatacttgtggcaataata
atgccagctctatgtttcatgaggataatgggtaacaaagctacaagaacacagattatt
ctgagttggataatagtggcaattggtttggtaagtgggaccttggggacatactcttcg
gttgcaaagatcattaaaaactatgaatga
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