Brassica rapa (field mustard): 103866741
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Entry
103866741 CDS
T03449
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103866741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103866741
Spliceosome [BR:
brp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103866741
Complex C
U5 SnRNP specific factors
103866741
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GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
Nbas_N
WD40_like
RMC1_N
Motif
Other DBs
NCBI-GeneID:
103866741
NCBI-ProteinID:
XP_009142963
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All DBs
Position
A05:complement(1993813..1995423)
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AA seq
334 aa
AA seq
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MEIMPRENENALSAPTPMELGPGPYGKQRTSSLEAPIMLLTGHPSAVYTMKFNPSGTLIA
SGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSMIVSASPDKTVRAWDVETGK
QVKKMAEHSSFVNSCCPTRRGLPLIISGSDDGTAKLWDLRQRGAIQTFPDKYQITAVSFS
DAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVW
DMRPYAPQNRCVKVFEGHQHNFEKNLLKCSWSPDGTKVTAGSADRMVHIWDTTTRRILYK
LPGHKGSVNECVFHPSEPIIGSCSSDKDIYLGEI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggagatcatgccaagagagaatgagaacgctttgtcagctcctactcccatggagttg
ggacctggtccctatgggaagcagcggacatcaagccttgaagcgccaatcatgctgcta
actggtcacccgagcgctgtctacaccatgaagttcaacccatccggaactctaatcgcg
tctggatcacacgacagggagattttcctctggagagtccacggggactgcaaaaacttt
atggttctgaaaggccacaagaacgctatccttgaccttcactggacaagcgacggctcc
atgatcgtatcagcgagtccggacaaaaccgtgagggcgtgggacgttgaaactgggaaa
caagtcaagaagatggctgagcattcgtcctttgtgaactcctgctgccctacgcgcaga
ggactgcctttgatcatcagcgggtctgatgatggaactgcaaagctttgggatttgcgt
cagagaggagctattcaaacgtttccggataagtaccaaatcacagcggtgagcttctct
gatgcagctgataagatcttcactggaggtgttgacaatgatgttaaagtctgggacttg
cggaaaggggaagccaccatgacgctcgagggacatcaagataccatcacggggatgagt
ttgagtcctgacggttcctaccttctcaccaatgggatggataacaagctctgcgtgtgg
gacatgcgtccttacgctccgcagaatcggtgtgtgaaggtctttgaagggcatcagcac
aactttgagaagaacttgctgaagtgttcgtggtcgcctgatggtactaaggtcactgct
ggtagcgcggaccgtatggttcatatttgggacacaaccactcggaggattctctacaag
ctcccggggcataaaggttcagttaatgagtgtgtgtttcacccatctgagcctatcatt
ggttcttgcagtagcgacaaagatatctacctgggagagatctaa
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