Brassica rapa (field mustard): 103866851
Help
Entry
103866851 CDS
T03449
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103866851
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103866851
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
103866851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_6
zf-rbx1
ATG16
zf-RING_UBOX
zf-C3HC4_5
zf-ANAPC11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
103866851
NCBI-ProteinID:
XP_009143085
LinkDB
All DBs
Position
A05:complement(2453326..2458380)
Genome browser
AA seq
882 aa
AA seq
DB search
MASTGEPDRKKRHFSSISPTEAAAAVKKQPFFWPSSEDKLDTAVLQFQNLKLSQKLEAQQ
VECSILEDRLSQIKDKQLPYSSSLKTVHKSWDKQLTDAVESCSVRVSGSSSGGHRSVNKE
DGSSPDIKDDFINRLLETGATESSSSSNICSNGMEDGRGNNTSTQVTQTLHNLVAATNDI
RCLKDELYPTVLKTGLDKDSCGQQLALNELESEVKSFRVALDDVLVKFKSLSRELKSYRD
ADARVRADLKRIRGELEDEVVELQQCNGDLSALRAERDATAGAFFPVLSPGNKLASSDKT
RDKQRDLQDMEGVLKELTVLASSRLQELKELHKERTKILERTSILQNKSKSVRGISSSQA
CLSLKDQLRRSKEAVFKYMALLEKLQVEKDSLFWKERELNIKNELVDVSRRTSAVADSRM
ASLDVEIQKQHDEKTRIKTRLGNISKERGRKELFADTKALVSSFPGEMSSMRSQLSSYKE
TAGGIHSLRADVQSLSGVLCRKGKECEALHLRSAGYASQLRDLNATVRDLKNSHEELQLF
LDMFKRESTDPRDIAEAKEQEYRAWAHVESLKSSLDEQNLELRVKAANEAEAVSQQMLAA
AEAEIADLRQRMDDCKRDVAKHSDVLKSKNEEHGTYLSEIQTIGSAYEDIVPQNQQLLLQ
VTERDDYNIKLYLEGITSRQMQDALLIDKYIMDKDIQQASASASFLSKRSLRIEDQMRLC
TDQYQRLAEDRYQKSITLENLQKKRADVVNGLEQARSKLEESHSRVEKSRVDYGALELEL
ETERFNRRRIEEDMETAKKKVSRLRSLIEGSSATQKLRQELSEFKEILKCKACNDRSKEV
VITKCFHLFCNPCVQKIIGTRQRKCPTCSASFGPNDIKPIYI
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacaggcgagcctgaccgtaaaaaacgtcactttagctccatatcacctaca
gaagctgcagccgccgttaagaagcagcccttcttctggccctcctctgaagacaagctt
gatactgcagttcttcagttccaaaacttgaagctatcgcaaaagctagaggctcagcag
gttgagtgttctattcttgaagataggctttctcagatcaaggacaaacagttgccgtac
agttccagtttgaagactgttcataagtcttgggataagcagcttacagatgcagttgaa
tcatgctccgttcgtgtgagtggttcaagcagtggagggcataggtctgtaaacaaggag
gatgggtcttctccggatattaaagacgatttcatcaaccggctacttgaaactggtgcc
actgagagctcctcctcatccaatatctgctcgaatgggatggaagatggtagagggaat
aacacatcaactcaggtgacgcagacattgcataacctagtagccgccactaatgatata
aggtgtctgaaggatgaactgtaccccacagttctcaaaaccggtcttgataaagattcg
tgtggtcagcagctagcgctgaatgagttggaatcagaagttaaaagtttcagagtggct
ctagatgatgtacttgtgaagttcaaatcactttcgagagaattgaagagctatcgagat
gccgatgctagagttagagcagaccttaaacgaataagaggggagctagaggatgaggtc
gtggagcttcaacaatgtaatggtgacttgtcggcactgagagcggaaagggacgcaaca
gcaggggcgttcttcccggtgctgagccctggaaataagcttgctagtagcgataagaca
agggataaacaaagggatttgcaagacatggaaggggttctgaaagagttaacggtcctg
gcttcaagcaggctacaagagctgaaagaacttcataaggagaggacaaagattcttgaa
agaacgagcattttacagaacaagtcaaagtctgtgaggggcatctcttcttctcaagcc
tgcctttctttgaaagaccagctgagaagatccaaagaagcagttttcaagtatatggct
ttacttgagaaactgcaggttgagaaagatagtcttttctggaaggaaagggaattgaac
ataaaaaacgaacttgttgatgtttctcgaaggactagtgccgttgctgattctagaatg
gcttctttagatgtggagatacagaaacagcatgatgagaaaactcgaatcaagactagg
ttgggaaacatctcgaaagagcgaggtaggaaagaactctttgcagatacgaaggcgtta
gtttcttcgtttccaggggaaatgagttccatgcgaagtcagttaagcagttataaagag
actgctggaggtattcattctctgcgggctgatgtccagtccctctccggggttctctgt
aggaagggaaaagagtgtgaagcattgcatctgagatcagctggttatgcttctcagcta
cgtgacctgaatgctacggttcgtgatttgaagaacagccacgaggagttacagttgttt
ttggacatgtttaaacgcgagtccactgatccgagggacatagctgaagccaaggaacaa
gagtacagggcctgggctcatgttgaaagtttgaagtcctcccttgatgagcagaatctt
gagctgcgcgttaaggcagcaaacgaagctgaagcagtatcacaacaaatgttggctgct
gccgaagctgagattgctgatttaagacagagaatggatgattgcaaacgggatgtcgca
aagcattctgatgtcttgaaatccaaaaatgaggaacatggaacatatctttctgaaata
cagacaattggaagtgcctacgaggacattgtaccacaaaaccaacagcttttgcttcaa
gtcactgagagggatgactataacatcaagctttacttggaaggcataacttcaaggcag
atgcaagatgctctgctaatcgataaatacatcatggataaagatattcagcaagccagt
gcatcagccagtttcctctccaagagatccttaagaattgaagatcagatgaggctctgc
acagatcagtatcagagactagcggaagatagatatcaaaagtctatcactcttgagaat
ctgcaaaagaaacgtgcagatgttgtgaatggcttggaacaagctaggtcaaagctggag
gagtcgcattctagagttgagaaaagtcgggtggactatggagcattggaacttgagctg
gaaaccgaaaggttcaataggagaaggatagaagaggacatggaaacagccaagaagaaa
gtctctcgtcttaggtctctgatagaaggatcctcagccactcagaaactcagacaagaa
ctcagtgaattcaaagagatcttgaagtgtaaggcctgcaacgaccgctcaaaagaggtg
gtgatcacgaagtgcttccatttgttttgcaacccatgtgtgcaaaagatcataggaact
cgacagaggaagtgtccaacttgctcagcaagttttggacccaatgatatcaagcctatc
tacatatga
DBGET
integrated database retrieval system
