Brassica rapa (field mustard): 103866919
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Entry
103866919 CDS
T03449
Name
(RefSeq) homeobox-leucine zipper protein HDG1 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103866919
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103866919
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
CEP89
MDM1
Homez
Motif
Other DBs
NCBI-GeneID:
103866919
NCBI-ProteinID:
XP_009143166
UniProt:
M4CL48
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Position
A5
Genome browser
AA seq
786 aa
AA seq
DB search
MNFSGFLHHDDDKTPGGETVGGGNHFFSPATAMSGGPVQFSSPRLSLGLQTNVENNGGEV
GRTGESFEVSVTRRSPESRSGSDNVEALSGEDDLDASDRPLKKKKRYHRHTPHQIQELES
VFKECPHPDEKQRLDLSRRLNLDTRQVKFWFQNRRTQMKTQIERHENSLLRQENDKLRAE
NMSVREAMRNPMCGHCGASAVLGEISLEEHQLRIENSRLKDELDRLCALAGKFINRSDDA
GSHQLPNSTLKLGVGSRNVDAGGGFTLLHPAFEISSSHFYSGLSAPVNRTGTDIASGGVD
EKSLYLELAVFAMDELVKMAQTSEPLWIQSSKGKREMLNREEYDKSFRPCLGPKPGGFVS
EASKEVGMVIINSLALVETLMDSERWAEMFPCMIAKNSTIEIISSGMGGTRNGAIQLMQA
ELQLLSPLVPVRQVTFLRFCKQHAEGVWAVVDVSVDRVSDRGGSASARSSLSCRRLPSGC
LVHDMPNGYSKVTWIDHTEYDETNIHHSYRPLVSSGLAFGSKRWVSALQRQCESLAILMS
SAIPNRSKPTPAISSIGKKSMLRLAQRMTENFCRGVCASSSQKWSKLDIGNIDEDVRIMT
RKNVNDSGEPPGILLSAATSVWVPVTPRRLFDFLRDELLRSEWDILSNGGPMQEIANIFK
GQDHSNSVSLLRSTAMNASQSSMLILQETSIDASGAVVVYAPVDIPAMHSVMNGGDSAYV
ALLPSGFAILPDGQGTEETGSLLTVAFQILVNSLPTAKLNVESIETVSNLISCTVQKIRA
ALRCEK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcagcgggtttctccatcacgacgacgataaaacccccggcggcgaaaccgtc
ggtggtggaaaccatttcttttcaccagccaccgctatgtccggtggtccagttcaattc
tcttctcctcgtctctctcttggccttcaaacaaatgtagaaaacaacggaggagaagtg
ggcagaacaggcgagagcttcgaggtgagtgttactcggagaagtccagagagtagatct
ggaagcgataacgtcgaagcactttccggcgaggatgacttagacgcttctgatagacct
ttaaagaagaagaaacgttaccaccgacatactcctcatcaaatacaagaactcgaatcg
gttttcaaggagtgtcctcatcccgatgagaagcaacggctagatcttagccgtcggctc
aacttggatactcgccaagtcaagttctggttccaaaaccgccgtacacaaatgaagacg
caaattgagcgacatgaaaactctttattgagacaagagaacgataagctccgagctgag
aacatgtcggtgcgggaagccatgaggaatcctatgtgcggtcactgcggtgcctccgct
gttcttggagagatctctcttgaagagcatcagttaagaatcgagaactcacgtctcaaa
gatgagctggaccgtttatgtgccttagccggaaaattcattaaccggtccgatgacgcc
ggttcacatcagttaccaaactctacgctcaaactcggtgtcggttcaagaaatgttgat
gctggtggtggttttacactactccatcctgcgttcgagatttcatcatctcatttctac
tccggtttaagtgctccggttaaccgtaccggtacggatattgcttccggaggagtcgat
gagaagtcattgtatctggaattagctgttttcgctatggacgagctagtgaaaatggcg
caaacaagtgagccactttggatccaaagctcgaaaggcaaacgtgagatgcttaaccgg
gaagaatatgacaaaagtttcagaccttgcctcggtcctaaaccgggcgggtttgtctcg
gaagcttcgaaagaagtaggaatggttataattaatagcttagccctcgtcgaaacctta
atggactcggaacgttgggcggagatgtttccatgtatgattgcaaaaaactcgactata
gaaatcatctctagtggtatgggagggacaagaaacggtgctattcaactgatgcaagct
gagcttcagttgctatcaccgctagtgccagttcgtcaagtgactttcttaaggttttgt
aaacaacacgcagaaggtgtttgggccgtcgtggatgtctctgtcgatagggtaagcgat
cgtggcggttcagcctcagctcggtcttctctgagctgtagaaggctaccatctggttgc
cttgtccatgacatgcccaatggctactctaaggtaacatggattgaccacaccgagtat
gacgagaccaacatccaccattcgtaccgtccattagtcagctcgggtctggccttcggc
tccaaacggtgggtatccgctctgcaacgacaatgtgaaagcctcgccatcctcatgtcc
tcagcaatacccaaccgcagcaaacccacaccagccataagctctatagggaagaagagt
atgctaaggctagcacaaaggatgactgagaatttttgtagaggcgtgtgcgcttcttct
tcacagaaatggagtaagcttgacattggtaacatagatgaagacgtgaggatcatgact
aggaagaacgttaatgactccggtgaaccaccggggattcttttaagcgccgccacctcc
gtgtgggtcccggttacaccgagacgtctctttgattttctgagagatgagcttttgaga
tcggaatgggatattttatccaacggtggacctatgcaggagattgctaacatcttcaag
ggccaagatcactctaactccgtctctctcttacgttccactgctatgaatgcgagccag
agtagtatgttgatactgcaagagacaagcatagatgcatctggggctgtagttgtatac
gcgccggttgatatccctgcgatgcattctgtgatgaacggtggagattctgcttacgtg
gctctacttccttctgggtttgctatactccctgatggtcaagggacggaggaaaccggt
tcgcttctaaccgtggcgtttcagattttggtcaactctctacccacggctaagctcaac
gtggaatcgatcgagaccgttagtaatctgatatcatgcaccgttcagaaaatcagagct
gctctgagatgcgagaaatag
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