Brassica rapa (field mustard): 103866998
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Entry
103866998 CDS
T03449
Name
(RefSeq) isoamylase 1, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00500
Starch and sucrose metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
103866998
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
103866998
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Gene cluster
GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
GHL10
Motif
Other DBs
NCBI-GeneID:
103866998
NCBI-ProteinID:
XP_009143269
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Position
A05:complement(3102674..3108675)
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AA seq
816 aa
AA seq
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MMISHSLSVINTSSSLFHTKARRRRRRRSSMDALKCSSSTFLPLTNLNTLFSNHAFPKSP
APNFNRRAAQPLSLSAKDTARTSEPENVAVVEKPPPSKRFLVSDGLPSPFGATVRDNGVN
FSVYSSNSVSATICLISLSDLRQNKVTEEIELDPSRNRTGHVWHVFLKGSFEDMMYGYRF
DGKFSPEEGHYYDSSNILLDPYAKAIISRDEFGVLGADDNCWPQMACMVPTLGEEFDWEG
DMPLKLLQKDLVIYEMHVRGFTRHESSNIEFPGTYQGVAEKLDHLQELGINCIELMPCHE
FNELEYYSYNPILGDHRVNFWGYSTIGFFSPMSRYSSASSRNFAGRAINEFKTLVKEAHK
RGIEVIMDVVLNHTAEGNEKGPIFSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVV
RQFIVDCLRYWVTEMHVDGFRFDLGSIMSRSSSLWDAANVYGADVEGDLLTTGTPVSCPP
VIDMISNDPVLRGVKLIAEAWDAGGLYQVGMFPHWGIWSEWNGKFRDVVRHFIKGTDGFS
GAFAECLCGSPNLYQGGRKPWNSINFVCAHDGFTLADLVTYNNKNNLANGEENNDGENHN
CSWNCGEEGDFVSISVKRLRKRQMRNFFVSLMVAQGVPMIYMGDEYGHTKGGNNNTYCHD
NYLNYFRWDKKEEAHDDYFRFCRLLIKFRDECESLGLDDFPTAKRLQWHGIAPETPDWSE
TSRFVAFSLVDSVKKEIYVALNTSHLATLVTLPNRPGYRWEPFVDTSKPSPFDCITHDLP
GRETAMKQYRHFLDANMYPMLSYSSIILLLSPIDDS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcagtcactctttgagtgtaatcaacacttcctcctctctctttcacacaaaa
gctcgaagaagaagaagaagaagatcatccatggatgcactcaaatgcagtagctccacg
ttcctccccctcaccaatctcaacactctcttctctaaccacgcgttccctaaatccccc
gcccccaatttcaaccgtcgagccgctcagccactctccctctccgccaaggacacagca
agaaccagcgaacccgaaaacgtcgccgtagtggagaaacctcctccctcaaagcgattc
ctcgtctccgacggactcccttccccgttcggcgccaccgtgagagacaacggcgtcaat
ttctccgtttactcttcaaactccgtctccgccaccatctgcttgatctccctctccgat
ctccgtcagaacaaagtgacggaggagattgagctcgatccgtcaaggaatagaacgggc
cacgtgtggcacgtgttcttgaaagggagtttcgaggatatgatgtacggttatagattc
gatgggaagttttctcctgaagaaggtcattactatgactcctccaatatcttattggat
ccttacgctaaggcaattattagcagggatgagtttggagttttgggagctgatgataat
tgttggcctcaaatggcgtgtatggtgcccactctcggtgaagagtttgattgggagggg
gatatgcctctgaagcttttacagaaggatcttgtcatatatgaaatgcatgtgcgaggt
ttcacaaggcatgaatctagcaacattgagttccctggcacgtaccagggtgttgcagag
aagcttgatcatttgcaggagcttgggataaactgcattgaattaatgccatgtcacgag
tttaatgagctggagtattacagctacaatccgatattgggagatcacagggtaaatttt
tggggttattctaccattgggtttttctcgcccatgagcagatactcatcggcaagctct
cgcaactttgctggaagagccattaatgagttcaaaactcttgttaaagaagcacataaa
cgaggaattgaggttatcatggatgtcgttttgaaccacactgccgaaggcaatgaaaaa
ggacctattttctcatttagaggagttgataacagtgtctattacatgcttgctccaaag
ggcgagttctataattattcaggctgtggcaatacttttaactgcaatcatcctgtagtg
cgtcagttcatagtggattgcctgagatattgggtaacagaaatgcatgttgacggcttc
cgctttgatcttggttcaatcatgtcaaggagtagcagcctttgggatgcagccaatgtt
tatggggctgatgtagaaggtgacttgctgaccactggtacccctgttagctgccctcct
gtaattgacatgataagtaacgatccagtgcttcgtggtgttaagctaatagctgaagca
tgggacgcgggtggcctttaccaagttggcatgtttccacactggggtatttggtctgag
tggaacggaaagttccgggatgttgttagacacttcataaaaggcaccgatggcttttcc
ggtgcttttgctgaatgtctctgtggaagcccaaatttgtatcagggagggaggaaacca
tggaacagcatcaattttgtatgtgcgcatgatggttttactttggcggatttagtcact
tacaacaataagaataacttggcaaatggagaagagaataatgatggagagaaccacaac
tgcagctggaactgcggagaggagggagactttgtgagtatctcagtgaagagattaagg
aaacgacagatgcgaaatttctttgtttccctcatggttgcccagggcgtcccgatgatc
tacatgggagatgaatatggtcatacgaaaggggggaacaacaacacctattgccatgac
aactatttaaactattttaggtgggataaaaaggaagaagcacatgatgactacttcaga
ttctgccgtcttctgatcaagttccgtgatgaatgtgaatcacttggcctggacgacttc
ccaaccgcaaagcgtctgcagtggcatggtattgctcctgagacgccagattggtctgaa
acaagtcggttcgttgcattttcactggtggattcagtgaagaaagaaatatatgtggcc
ttgaacacgagtcatttagccacactagtgacactgcctaaccggcctggataccgatgg
gagccattcgtagacacgagcaaaccaagccctttcgactgcataacacacgatctccca
gggagagagacggcgatgaagcagtacagacacttcttagatgcaaatatgtatccaatg
ctcagttactcttccatcatcctcctcctttcaccaatcgacgacagctga
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