Brassica rapa (field mustard): 103867422
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Entry
103867422 CDS
T03449
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3 isoform X4
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103867422
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
103867422
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
103867422
NCBI-ProteinID:
XP_009143744
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Position
A05:5509865..5519477
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AA seq
597 aa
AA seq
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MGAAETLTDPSSLCESNYMGNGDLSDTDMVITVRNTLASVQNGECYRYDELVKTMQATKN
SDLEAQLVTALKALSSSVAYLDIIHHEKLLSLVFRMSLWDLKPHVMDALVGLLISLAVTT
GKYLDPCLNMLVRHFLPPDWVIRRLSQHRVVKQKMEVLSHVHEALLKICILFPRAPSRIL
DMLPKINKKGQVVEIFVENLLKLENSLMGQDDGSKIFMMVMERLRDMDLEIDWDGIPQDD
SSRGLFDMELEDAVEDNTMKEGDEFQVGSLTSDGNVIFESLDKLMVLSFDHLESCKLAGR
LDQVFEKLFEAFEHYIMDIHKTKVSQFLMFYACSLDPENCGVKFAIKLMDIFLFSNKLPT
RMSAMAYLASYLARGKFLHVSYVASILKRLVDECADHCRTCSDDINSKAHQIFYSGCQAI
MYVLCFRMRSILAVPRFRSELIPLESILMHKLNPLKECLPWVVAEFLKQAKAGGLFVVSD
SFIFDKLLESELSRGSKRLDAFFPFDPCLLKSSNSFISGNFIYWSMVRPTYDEDDEEDVE
IIVNVDEESDEEEEGDVDHVMDKMSITPKHYFMNEMEREKLLKMPSVIRPSISPQSL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagcagagactctaactgatccctcaagcctatgtgagtctaactatatgggc
aacggtgatttgtctgacacggatatggtgattaccgtgagaaacacccttgcttctgtc
caaaacggggaatgttaccgttacgatgagcttgttaaaactatgcaagctaccaaaaac
tctgatcttgaagcacagcttgtgacagcattgaaagcattgtcaagctctgtggcttac
ttagatatcattcaccatgaaaagcttctttctttggtttttagaatgtcattgtgggat
ctcaaacctcatgtcatggatgctttggtgggtctactcatatcactggctgtcactaca
ggaaagtatctggacccttgtctgaatatgctcgtacgccactttttgccaccggattgg
gtgattagaagactttcgcagcaccgtgtagtgaaacagaagatggaagttctttctcat
gttcatgaagcccttctgaaaatctgtattttgtttcctcgtgctccctcgagaatatta
gacatgctacccaaaataaacaaaaagggccaagtggtagagatatttgtggagaactta
ttaaagctggagaatagtctaatgggacaagatgatggcagcaagatttttatgatggtg
atggagaggctacgagatatggatttggagattgattgggatggtattccacaagatgac
tcaagtagaggtttgtttgatatggaacttgaagatgcagttgaagataatactatgaaa
gaaggagacgagtttcaagtgggatctctaacatcggatggaaatgtaatttttgagtct
ttggataaattgatggtcttatcttttgatcatcttgaatcctgtaaacttgctggtcgt
ttggatcaggtgtttgaaaagctcttcgaggcatttgagcactacattatggatatacac
aaaacaaaagtttcgcagtttctgatgttctatgcatgttcactggatcctgaaaactgt
ggtgtgaaatttgcgattaagctgatggacattttcctcttcagcaacaagctacctaca
aggatgagtgctatggcttatctagctagctacttggctcgtgggaagtttttacatgtt
tcctatgtggctagcatattaaaaaggttggtagatgagtgtgcggatcactgtagaact
tgcagtgatgatattaactctaaggcacatcagattttctactccggatgccaggcgatc
atgtatgtgctctgcttccggatgagatccatcctagctgttcctcgctttcggtctgag
cttataccattggagtcaattttaatgcacaaactaaacccgttaaaggaatgccttcca
tgggtagttgcagagttccttaaacaagctaaagcaggtggtctgtttgtcgtctcagac
tccttcattttcgataagctacttgagtctgagctctcccgtgggtctaagaggcttgat
gcattcttcccctttgacccttgcttgctgaaaagctctaacagctttatctccgggaat
ttcatctactggtcgatggtgagaccgacctatgacgaagatgatgaggaagatgttgag
atcattgtgaatgtggatgaggagagtgatgaagaggaagagggtgatgttgatcatgtc
atggacaagatgtccataacgcctaagcattatttcatgaacgagatggaaagagagaaa
cttctgaaaatgccttccgtaatcagaccttccattagtcctcaatccttatga
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