Brassica rapa (field mustard): 103867430
Help
Entry
103867430 CDS
T03449
Name
(RefSeq) ABC transporter C family member 2
Organism
brp
Brassica rapa (field mustard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
MMR_HSR1
AAA_16
DUF87
AAA_29
Dynamin_N
AAA_23
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
103867430
NCBI-ProteinID:
XP_009143751
UniProt:
M4CMG4
LinkDB
All DBs
Position
A05:complement(5572637..5581328)
Genome browser
AA seq
1626 aa
AA seq
DB search
MGFEEALEWYCKPAPNGVWTKQVDNAFGAYTPCATDSFVLVISHVALLVLCLYRIWRTMK
DHKVERFCMRSRLYSYLLALLAAYGTAEPLFRLIMGVSVLDLDGDGLPPYEAFGLGVEAL
TWGSVMIMICMETKIYIHELRWYVRFAVVYALVGDMVLLNLVLSVKEFYTSYVLYLYISE
VAVQVLFGILLFVHLPNLEPYPGYMPLGSETVDDHEYEELSEGQQICPERQANIFDKIFF
SWINPLMTLGSKRPLTETDVWHLDTWDQTETLFTSFQQSWDKELQKPKPWLLRALNSSLG
GRFWWGGFWKIGNDCSQFVGPLLLNQLLKSMQQDEPAYMGYIYAFSIFVGVVLGVLCEAQ
YFQNVMRVGYRLRSALIAAVFRKSLRLTNEGRRKFQTGKITNLMTTDAESLQQICQSLHT
MWSAPFRIIVALILLYQQLGVASLIGALLLVLMFPLQTIIISKMQNLTKEGLQRTDKRIG
LMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKSQLLGALNMFILNSIPVLVTIV
SFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNIITQVVNANVSLKRLEEVLATEER
ILLPNPPIEPGQPAISIRNGFFSWDAKGDRPTLSNINLDVPLGSLVAVVGSTGEGKTSLV
SAILGELPATSDAMVTLRGSVAYVPQVSWIFNATVRDNILFGSPFDRERYERVLDVTALK
HDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGQQVF
EKCIKRELGNKTRVLVTNQLHFLSQVDRIILVHEGTVKEEGTYEELSNNGPLFQRLMENA
GKVEEYSEENGEAEAVQTAVAPLTNGTTNTLQMNGADDKKAKEESKGGKSVLIKQEERET
GVVSWRVLKRYQDALGGAWVVMMLLLCYVLTEVFRVTSSTWLSEWTDAGTPKSHGPIFYN
LIYALLSFGQVLVTLTNSYWLIMSSLYAAKRLHDNMLHSILRAPMSFFHTNPLGRIINRF
AKDLGDIDRTVAVFVNMFMGQVSQLLSTVVLIGIVSTLSLWAIMPLLVLFYGAYLYYQNT
AREVKRMDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSAN
RWLGIRLETLGGLMIWLTASFAVMQNGKAENQQAFASTMGLLLSYALNITSLLTGVLRLA
SLAENSLNAVERVGNYIEIPSEAPLVIESNRPPPGWPSAGSIKFEDAVLRYRPQLPPVLH
GVSFFIHPTDKVGIVGRTGAGKSSLLNALFRIVELEKGRILIDECDIGKFGLMDLRKVLG
IIPQSPVLFSGTVRFNLDPFGEHNDADLWESLERAHLKDTIRRNPLGLDAEVSEAGENFS
VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTI
IDCDKILVLDSGRVQEFSTPENLLSNERSSFSKMVQSTGAANAEYLRSLVLENKRERDGD
DSQQPLQGQRKWLASTRWAAAAQFALGVSLTSSHNDLQILEIEDDGSILKRTKDAVVTLR
NVLEGKHDKEIAESLEGHNISRDGWLSSLYRMVEGLAVMSRLARNRMQQPGYNLEGNSFD
WDNVEM
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgaggaggcgttggagtggtactgcaagccggcgcctaacggcgtttggacg
aaacaagttgataacgcgtttggcgcttacacgccctgtgctactgactcttttgtcctt
gtaatctctcatgtggctctcttggttctgtgtctgtaccgtatatggcgcaccatgaag
gaccacaaagtggagaggttctgcatgaggtcgagattgtatagctatttgttggctctt
ttggcggcttatggtactgctgagccgttgtttaggttgatcatgggggtttctgttttg
gatttggatggagatgggcttcctccttatgaggcgtttggtttgggggttgaagctttg
acttgggggtctgtgatgatcatgatttgtatggaaactaaaatttacatccatgaactc
cgttggtacgttaggtttgctgtcgtatatgctcttgtgggggatatggtcttgctaaat
cttgttctctcagtcaaggagttctataccagttatgtactgtatctctatataagcgag
gtggcagttcaggtcctatttggaattctattgtttgtgcatcttcccaatttggaacct
taccctggctacatgccattggggagtgaaactgtggatgatcatgagtatgaagagctt
tctgagggacaacaaatatgtccggaaaggcaagcaaacatatttgacaagatcttcttc
tcatggattaatccgttgatgactctgggatctaaaaggcctctcacagagacggatgtg
tggcatctggacacttgggatcagactgaaactctgttcaccagcttccagcaatcctgg
gataaggaactacaaaagccgaaaccgtggttgttgagagcattaaacagtagtctggga
ggaaggttttggtggggaggattttggaagattgggaatgattgctcacaatttgtaggg
cctcttttactgaatcaactcttaaagtcaatgcaacaagatgagcccgcttacatgggt
tacatctatgcgttctccatctttgttggagtggtactgggggtgctatgtgaagctcaa
tatttccagaatgtcatgcgtgttggttaccgactaagatctgctctgattgctgctgta
ttccgcaaatcgttgaggttgactaatgaaggtcgtagaaagtttcaaacgggaaagata
accaacttaatgaccactgatgccgaatctcttcagcaaatttgccaatcacttcatacc
atgtggtcggctccatttcgaatcattgtagcactgattctcctctaccagcaattgggc
gttgcctcgctcattggtgctttgttgttggtccttatgttccctttacagactattatt
ataagcaaaatgcagaatctgactaaggaaggtcttcagcgtactgacaagcgaattggt
cttatgaatgaggttttagctgcaatggatacagtaaagtgttatgcatgggaaaacagt
tttcagtccaaggtccaaactgtacgtgatgatgaattatcttggttccggaaatcacag
ctcctgggagcgttgaatatgttcatactgaacagcattcctgttctcgtgactattgtt
tcatttggtgtgttcacattgcttggaggagacctgacccctgcaagagcgtttacatcg
ctctctctctttgctgtgcttcgtttccctctattcatgcttcccaacatcataactcag
gtggtgaatgctaatgtatccttaaaacgtttagaggaagtgttagcgacagaagagaga
attctcttaccaaatcctcccattgaacctggacagccagccatctcaataagaaatgga
tttttctcttgggatgctaagggggataggccgacgttgtcaaatattaacttggatgtg
cctcttggcagcctagttgctgttgttggtagtacaggagaaggaaagacctccttggta
tctgctatccttggggaacttcctgcaacatctgatgcaatggttactctcagaggatca
gttgcttatgttccacaagtttcatggatctttaatgcaacagtacgcgacaatatattg
tttggttctccttttgaccgtgaaagatatgaaagggtccttgatgtgactgcgctcaag
catgacctagagttactgcctggtggtgatctcactgagattggtgaaagaggtgttaac
atcagtggaggacagaagcagagggtgtcaatggctagagccgtttactcaaactcagat
gtattcatctttgatgaccccttaagtgcccttgatgctcatgttggtcaacaggttttt
gagaaatgcataaaaagagaattggggaacaaaacgagagttctcgttacaaaccagctc
catttcctatcgcaagtggacagaatcatacttgtccatgaaggcacagtgaaagaggaa
ggaacatatgaagagctatccaataacggccctttgtttcagaggttaatggaaaatgca
gggaaggttgaagaatattctgaagaaaacggagaagctgaggctgttcaaacggccgta
gcaccattaacgaacggaaccacaaatactcttcagatgaatggcgctgacgataagaaa
gccaaagaagaaagcaaaggaggaaaatctgttctcatcaagcaagaagaacgtgaaact
ggagtagtgagctggagagtcctgaagaggtaccaggatgcacttggaggagcatgggta
gtgatgatgctccttttatgctacgtcttgacagaagtattccgggttaccagcagcacg
tggttgagtgaatggactgatgcaggaactccaaagagtcatggacccattttctacaat
ctcatttatgctcttctctcatttggacaggttttggtgacattgaccaattcatattgg
ttgattatgtccagtctttatgcagctaagaggctacacgacaatatgcttcattccata
ctaagagccccaatgtccttcttccacaccaatccattaggacggataatcaaccggttc
gcaaaagatcttggtgatattgatcgaactgttgccgtctttgtaaacatgtttatgggt
caagtctcacagcttctttcaactgttgtcttgattggcattgtcagcactttgtcctta
tgggccatcatgcccctccttgtcttgttttatggagcttatctctattaccagaacaca
gctcgtgaggttaagcgtatggactcgatcacaagatctcccgtttatgcacagtttgga
gaggcgttgaacggcttatcaaccatccgtgcctacaaagcatatgatcggatggctgag
atcaacggaagatcaatggataacaacatcagattcactctcgtcaacatgagtgccaac
cgttggctcgggatccgtttagagacactcggtggtctcatgatttggctgacagcgtcc
ttcgccgtcatgcagaacgggaaagctgagaaccaacaagcatttgcatctacaatgggt
ttgctactcagctacgcgttaaacatcactagcttgctaacaggtgttcttagactcgcg
agtttggctgagaacagtctgaacgcagtagagcgtgttggcaactatatagagatacca
tcagaggctccgcttgttattgagagcaaccgtccacctcctggatggccatcagctggg
agcataaagtttgaggatgctgttctacgttacaggcctcagctaccacctgtgcttcat
ggtgtttctttctttattcatccgacggataaggttgggattgttggaaggacgggagct
gggaagtcaagcttgttgaatgctttgtttagaatcgtggagctggagaaagggaggata
ttaatcgatgagtgtgacattggcaagtttggacttatggacttgcgtaaagtgcttggg
atcattccacagtcaccggttcttttctctggaactgtgaggtttaatcttgatccgttt
ggtgaacacaatgatgctgatctgtgggagtctctggagagggctcacttgaaggatacc
attaggagaaatcctcttggtcttgatgctgaggtctctgaggcaggagagaacttcagt
gtgggacagaggcagttgttgagtctctcacgtgcattgttgcggagatccaagatactg
gtccttgatgaagcaactgctgctgttgatgttagaactgatgctctcatccaaaagact
atccgagaggagttcaagtcatgcaccatgctcatcatcgctcaccgtctcaacaccatc
atcgactgtgacaaaatcctcgtccttgattccggaagagttcaagagttcagtacaccg
gagaaccttctatcaaacgaaagaagctcgttctctaagatggttcaaagcacaggagct
gcaaatgcagagtatttgcgtagtttagtacttgagaacaagcgtgagagagatggtgat
gactcgcaacaacctttgcaaggacaaaggaaatggctagcttctactcgctgggctgca
gctgctcagtttgcgctaggtgtgagtcttacatcatcgcacaacgatcttcaaatcctt
gagatagaagatgatgggagtatcttgaagagaacgaaagatgcggttgtgactttgcgc
aatgttctggaagggaagcatgacaaggagattgcagagtcgcttgagggacataatata
tctagagacggttggttgtcatcactctatagaatggtagaagggcttgcggtgatgagc
agattggcgaggaacagaatgcaacaaccaggttacaatttggaaggaaactcgtttgac
tgggacaatgtcgagatgtag
DBGET
integrated database retrieval system
