Brassica rapa (field mustard): 103867606
Help
Entry
103867606 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103867606
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103867606
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103867606
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103867606
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103867606
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103867606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
DUF7181
Motif
Other DBs
NCBI-GeneID:
103867606
NCBI-ProteinID:
XP_009143930
UniProt:
M4CMW7
LinkDB
All DBs
Position
A05:6976900..6988158
Genome browser
AA seq
1166 aa
AA seq
DB search
MGKQLKKGRAPPGGNQFSKKVAKQSAETVMEQRCCVHFDKCVDLNKLLKKMKACKEIKCG
ECKEGVDMKRRSEGKVSSFSCDAAKRAVWLCLECGRYCCGGVGLPTEPQSHVMHHIKMTC
HRLVIQCENTRLRWCFACQSLLPFEKEVNGERKDLLLEAVKLIKERSSKICSGEAEAEED
SRSSSSISGEIRGSGYGVRGLVNLGNTCFFNSVLQNLLSLDRLRDRLFKEDQSCGGPLVS
SLKKLFTEATSEAGLFNSVINPWDFFGSLCSKAPQFRGYQQHDSHELLRCLLDGLSMEES
SLRKKHDADESEKPTLVDYVFGGEVSSTISCLECGHSSKVYEPFLDLSLPVPSKKQTLSQ
EERSKLSPPTKVLENVADSKDSSEPVSTMTFDNNQVPEIIVTQKDMEEVGSFLCESFGIE
VSHNETDLVSQGGVSDNEDRSAKRKDKEPIMQCSKDTALNGIDEAQVWGYPDLEQSSSSA
NPLADEEVPLLVVDSQVMNMPYKDDKAVAEGKGAKQACSIVRQTFESSTETLMHDNDRSA
KPDKEAMQCSKDTASSEISAEIDEAQVWGYPDIGHSFSFAKPCADEEVPLLVADSQGGVS
VNDEGSAKQKDKEAIMQCSKDTASSGIDEAQVWGYPANPLANEELPLLVVDSQVMNMPYK
DDISYDDKTAAEGKGEKQACSIVRQTFESSTETLMHDNDGSAKPDKEDAQAMQCSKETAS
SEISEEIDIGHSSSSAKPCADEEVPLLVADSQVLYMPYKDDKTVAEDKGETSSSYVSGHH
DQTVDYVDFSWFFKEPDVSCDDKTVRECEDEVSSSLVSSHHGKTVDYAVLNEPDVSCNDK
TVKEREGEVTSSLVSSHHGKTVDYAVLNEPDVSCGDKTVKECEGEAPSSFVSSHHGQKID
NADYYWFFEEPEVSKGPAFGPPTKAEVSEAGFMGVSCNSDAEVVLDDSDSPVSVDTCLAM
FTKPEILSEDNAWHCENCSKNLKLQRLREKRERFGYGWVYDNGFDECRDDIFNQSFIDFN
NWDTIYDDEAVDSEEVVVRRAAIKRVQVNKAPPVLTIHLKRFSQDAQGRLSKLRGHVAFS
EFIDLGLYMDMDSRQDEEDQPVYMLAGLVEHSGTMRRGHYVAYIRGDDKERRDSSVWYRA
SDSFVRQVSFEEVLPSEAYILFYQRI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcagttaaagaaaggtcgagctcctccaggtgggaatcagttctccaagaag
gtagctaagcaaagcgcggagacagtgatggaacaaagatgttgtgtgcattttgataaa
tgcgttgatttgaataagctgttgaaaaagatgaaagcttgtaaggaaatcaagtgtgga
gaatgcaaggaaggagtggacatgaagagaagaagtgaagggaaagttagtagcttttct
tgtgatgctgctaagagagctgtttggctttgcttggagtgtggccgttattgctgtgga
ggtgttggtttgccaactgaacctcagagtcatgtcatgcatcacatcaagatgacgtgt
caccgtcttgtgattcagtgtgaaaacactcggttgagatggtgtttcgcttgccagtca
ctgctcccttttgagaaggaagtgaatggtgagaggaaagatttgttattggaagctgtg
aagctgattaaagaacgttcgtcaaagatttgctctggtgaagctgaggctgaagaagat
tcacgttcaagtagtagtatctctggtgagatcagaggttctggttatggtgtaagaggt
ttagttaaccttgggaacacatgtttctttaactctgtgttgcagaaccttctttctttg
gatcggttacgtgaccgcttgtttaaagaggatcagtcttgtggcgggcctcttgtttcc
tccctgaagaagctgttcacagaagcaacatcagaagcaggcttgttcaatagtgtgata
aacccatgggacttttttggttctttatgttctaaggctcctcagtttagagggtatcag
cagcatgacagtcacgagctgctaaggtgtctgttggatggtttgagcatggaagaatcg
agcttgagaaagaagcatgatgctgatgagagtgagaaacctactctggtagattatgtg
ttcggtggtgaagtttcaagcaccatctcttgtttggaatgtggacattcctcaaaggtt
tatgaaccctttttggatctctctttacctgttccctccaagaaacaaacactctctcag
gaagagagaagtaaactttcaccaccaacaaaggtccttgagaatgtggcagacagcaaa
gattcatcagaacctgtgtcaactatgacctttgacaataatcaggtccctgaaattatt
gtaacacaaaaggatatggaagaagttggtagttttttgtgtgaatcttttggaatagaa
gtctctcacaatgagaccgatctggtttctcaaggtggtgttagtgataatgaagacaga
agtgcaaaacgaaaagataaagagcctattatgcagtgtagtaaagacacagccttaaat
gggattgatgaggctcaagtatggggctatcctgatttagagcagagttcttcatctgca
aatcccttggctgatgaagaggttcctttgctggttgtagattctcaagttatgaatatg
ccttataaagatgataaagcagttgcagaaggtaagggtgcgaagcaggcttgttcaata
gttagacagacttttgaaagtagcacagaaacgctgatgcatgataatgacagaagtgca
aaaccagataaagaggctatgcagtgtagtaaagacacagcttcaagtgagatttcagca
gagattgatgaggctcaagtatggggctatcctgatatagggcatagcttttcatttgca
aagccatgcgctgatgaagaggttcctttgttggtagcagactctcaaggtggtgttagt
gtaaatgacgagggaagtgcaaaacaaaaagataaagaggctattatgcagtgtagtaaa
gacacagcttcaagtgggattgatgaggctcaagtatggggttatcctgcaaatcccttg
gctaatgaagagcttcctttgctggttgtagattctcaagttatgaatatgccttataaa
gatgacatatcctatgatgataaaacagctgcagaaggcaagggtgagaagcaggcttgt
tcaatagttagacagacttttgaaagtagcacagaaacgctgatgcatgataatgatgga
agtgcgaaaccagataaagaggatgcacaagctatgcagtgcagtaaagagacagcttca
agtgagatttcagaagagattgatatagggcatagctcttcatctgcaaagccatgcgct
gatgaagaggttcctttgctggtagcagactctcaagttctgtatatgccttataaagat
gataaaacagttgcagaagacaagggtgagacttcctcgtcgtatgtgagcggccaccat
gaccaaaccgtagattatgttgactttagctggttttttaaagagcctgacgtctcttgt
gatgataaaacagttagggagtgtgaggatgaagtttcctcttcactagtgagcagccac
catggaaaaaccgttgattatgctgtccttaacgagcctgacgtctcctgtaatgataaa
acagttaaggaacgtgagggtgaagttacctcgtcactagtgagcagccaccatggaaaa
accgttgattatgctgtccttaacgagcctgacgtctcctgtggtgataaaacagtcaag
gaatgtgaaggtgaagctccctcgtcatttgtgagcagccaccatggacaaaagatagat
aatgctgactattactggtttttcgaagagcctgaggtatctaaaggaccagcttttgga
ccaccaactaaagctgaagtttctgaagctggtttcatgggtgtcagctgcaactctgat
gctgaagtagtgcttgatgattcggattcacctgtctctgtagacacctgtttggctatg
ttcaccaagcctgagattttgtcagaagacaatgcttggcattgtgagaactgttcgaaa
aacctaaaactccaacggttgagagaaaagagagaaagatttggctatggatgggtgtat
gataatggttttgatgagtgcagagatgatatattcaaccaatcctttatagatttcaat
aactgggataccatatatgatgatgaggcagtagattcagaggaagtggttgtaagaaga
gctgcaattaaaagggtacaagtaaacaaggcaccacctgtcttgaccattcatctcaaa
aggtttagccaagacgcccaaggcaggctaagcaagttacgtggccatgttgctttcagt
gagtttatcgatcttggcctatatatggatatggactctaggcaggacgaagaagaccag
ccggtttacatgttggcagggttagtggagcattccgggacaatgaggagaggtcactat
gttgcgtacattagaggagacgataaggagaggagagactcatccgtttggtatcgtgca
agcgattcttttgtaagacaggtttcttttgaagaagttcttccttctgaggcgtatatc
ttattctaccaacgtatctga
DBGET
integrated database retrieval system
