Brassica rapa (field mustard): 103867641
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Entry
103867641 CDS
T03449
Name
(RefSeq) homeobox-leucine zipper protein HDG2 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103867641
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103867641
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
MRP-L20
DciA_cyano_C
Motif
Other DBs
NCBI-GeneID:
103867641
NCBI-ProteinID:
XP_009143974
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Position
A5
Genome browser
AA seq
719 aa
AA seq
DB search
MTISQLLRRSPRIANMSLPNYMEPVDDVNNNNNGETDNNENENNNNMNGGASFGDEEFDS
ENQEYGNTQDPRAAKRKRYHRHTQQQIQEMENFFKECPHPDDNQRKELSRQLGLDHLQIK
FWFQNKRTQNKNHQERHENLQLREENTRLRADNHHFREGLANASCPNCGGPTAVGEMSFE
EHHLLLENAKLTEEIRQLSEVAKYTGKAVMRYPVLPTPNQAPPFEPPMITNGSLGSVKEA
DKPLLIELAVGAMSELIALAQMNEPLWKEGVHGMILDLNEYTRNLQNGLGPKPVGFRTEA
SRETAIVFMRHMEIVHRLMDVNLWSTMFAGMVGRAITHDTLLTGRQGNLDGTIHLMTAEF
QVLSPLVSNRECYFVRYCKQHGEGLWGVVDISIDHLIPNLEPKCLRRPSGCLIQDMPNRV
SRVTWVEHVEVDDGGELHAMFKHLLNSGQALGANRWLSALDRQCERLAIMMAPNIPSIEP
GGQITVTNNAKQSLLELVERMSRGFFDGVTTSNADIWMNLGGYTGDSVKVTTRTSLNDPG
RPEGLILCAAHSFWVPAPPTTVFDYLRDENNRVNWDVLFLGGNPQKLTHIFNGRDNRNCV
SLLRSPNTSQSEMMMIEKSSTEPAASFLVYAPVSVPSMEKVLNGGDPKYVPLLPSGFAIL
PDGTAQPGKAGGSLVNVAFQMLVDSYPSGSLTFSSVSTIESLILAAANKIKACFTQQTP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcagtcagcttcttagaagatctcccagaatagcaaatatgtctctgccaaat
tacatggaaccagtggatgatgtgaacaacaacaacaatggagagaccgataacaacgaa
aacgaaaataacaacaacatgaatggtggtgctagttttggggatgaggaattcgacagt
gagaatcaagaatatggaaacactcaagatcctcgtgctgctaagagaaagcgatatcat
cgtcacactcaacagcaaatccaggagatggaaaacttcttcaaagagtgtcctcatcct
gatgacaatcagaggaaagaacttagccgtcaactgggactagaccatcttcagatcaaa
ttctggttccagaacaaacgcacccagaacaagaatcatcaagagcgccatgagaactta
caacttcgtgaggagaacactaggcttagagctgataaccaccactttcgtgaaggtctc
gctaatgcctcatgtcctaattgcggaggtcctaccgcagttggcgaaatgtctttcgaa
gaacatcatcttctcctcgaaaatgctaagttaaccgaagagatccgtcaattatctgag
gtggcgaagtatacaggcaaagctgtaatgagatatcctgttctgcctactcctaatcag
gctccacctttcgagcccccgatgataactaatggaagtctcggatcagtgaaagaggcc
gataagccattgctcatagagttagcagttggagccatgtcggagcttatagcgttggct
caaatgaatgaaccgctgtggaaggaaggagttcatggcatgatattagatttgaatgaa
tacacaagaaatttacaaaacggactcgggcctaaaccggtcgggtttagaaccgaggca
tcaagagaaaccgcgattgtgttcatgcgccatatggagattgttcacaggctaatggat
gtgaatctatggtcgaccatgtttgctggaatggttggtagagccataactcatgacacc
ctcttgactggacgccaaggaaacttggacggaactatccatctgatgactgctgaattc
caagttctatcgccgctagtctcaaaccgtgaatgctacttcgtccgctactgtaagcag
cacggtgaaggtttatggggggtggtcgatatatccatcgaccatctcattccaaacctg
gaacctaagtgtctgcgaagaccatctggatgtctgattcaagacatgccaaatagagtc
tccagggttacttgggttgagcatgtggaggtagatgacggaggtgaacttcatgccatg
tttaagcacttgctcaattctggtcaagctttaggtgctaaccgctggctttctgcattg
gaccgccagtgcgagcggttagccatcatgatggctccaaacattccatccatagaacct
ggtggtcaaataacggtaacgaacaatgccaagcagagcctgctggagttagttgagcgg
atgtctagaggtttctttgatggagtgacaacttctaatgcagatatatggatgaacttg
ggtggttatacaggagatagtgtgaaagtgacgactcggacgagcttgaatgatccagga
agacctgaaggactcattctctgtgcagcccattcgttttgggtcccggctcctcctacc
actgtctttgactacctcagagatgagaacaaccgagtcaattgggatgttctcttcctt
ggagggaatcctcagaagctgacacatatatttaatgggagggacaataggaactgtgta
tctttactccggagcccaaacactagccaaagcgagatgatgatgattgaaaagagctct
actgagccagcagcttcgttcctggtctatgcgcctgttagtgttccgtcaatggagaaa
gttctcaatggaggtgaccctaagtatgtgccattacttccatcaggttttgctatacta
ccagatggtacggctcagcctggaaaagcaggagggtcactcgtgaacgttgcgtttcag
atgctggttgactcatacccttcgggttcgctgacttttagctcggtttcaaccattgag
agtctgattctagcagccgcgaataagatcaaagcttgctttactcagcagactccttga
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