Brassica rapa (field mustard): 103867898
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Entry
103867898 CDS
T03449
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103867898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103867898
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103867898
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103867898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
103867898
NCBI-ProteinID:
XP_033147599
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All DBs
Position
A05:complement(7401054..7406448)
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AA seq
297 aa
AA seq
DB search
MEISYPIDMAGLVTSTRQQSPSNGNQISSSSRSLGGENDDTNCSAKLLDLEALNCPICCV
PLTSNIFQCDNGHIACPTCCNKLRNKCPSCALPIGLIRCRAMERVIKAVIVPCPNSMSGC
IKKFSYGNELTHEKECSFSRCYCPARNCNYTGSYKDLYSHFKTHNSERGYSYKFLFGEFA
EVYFVLTEYTSVVMRENEAGLLFVVQCFSEPYGVYVTVSCIAPSADEIGEFSCFISTTAV
NYSIPHNIMTFKSPKVMKIRKLSSETPEKDFFLVPSFFFPGRQALKLRICISKLEQE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttcttaccccatagacatggctgggcttgtaacctcaacaaggcaacaaagt
ccctccaatggaaatcaaattagttcatcttcaagatctttgggaggtgaaaatgatgat
acaaactgctcggcaaagctgcttgacttagaagctcttaactgtcctatttgctgcgtc
ccactgactagtaatatcttccagtgtgacaatggacatatagcttgccctacatgttgt
aacaaactgaggaacaaatgcccttcttgtgctcttcctattggtcttattcgttgccga
gcaatggaaagggtgattaaggcagtcattgtcccatgcccaaactctatgtctggttgc
ataaagaagttctcatatgggaatgagttaactcacgagaaggaatgtagtttctctcgt
tgctactgccctgcacggaattgcaattacactggctcttataaggatctatactcccac
ttcaaaactcacaatagtgaaaggggatatagttacaaatttctttttggggagtttgct
gaagtttactttgtattgactgagtatacttcagttgttatgagggaaaatgaggccggc
ctactgtttgtcgttcagtgtttcagtgagccatatggtgtttatgtgactgtgagctgt
atagctccttctgctgatgaaattggtgagttctcttgtttcatctccactactgcggtc
aattatagtatccctcataatatcatgacatttaaatcaccgaaggtcatgaaaattcgg
aaattgagttctgaaactcctgaaaaggatttcttcttggttccttccttcttctttcct
ggacgtcaagcgttgaagttgcggatttgtatcagcaagttggaacaagaataa
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