Brassica rapa (field mustard): 103867929
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Entry
103867929 CDS
T03449
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04144
Endocytosis
brp04517
IgSF CAM signaling
brp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103867929
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103867929
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103867929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103867929
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
brp04812
]
103867929
Membrane trafficking [BR:
brp04131
]
Others
Actin-binding proteins
Arp2/3 complex
103867929
Cytoskeleton proteins [BR:
brp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
103867929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
WD40_Prp19
ANAPC4_WD40
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
RMC1_N
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
EIF3I
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
eIF2A
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
B-prop_COPA_B_2nd
BNR_3
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
103867929
NCBI-ProteinID:
XP_009144270
LinkDB
All DBs
Position
A05:complement(7662284..7665692)
Genome browser
AA seq
381 aa
AA seq
DB search
MAVVDVHRFAESITCHAWSPDLSMVALCPNNNEVHIYKSSQEQDQWERLHVLEKHDQIVS
GIDWSSKSNRIVTVSHDRNSYVWSLEGGEWVPTLVILRLNRAALCVQWSPNENKFAVGSG
AKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGV
DTKDPKAGSPAESKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSP
LAQSVAFRDLPLRDVLFISEKMVIAVGYDSNPMVFAADDTGIWSFIRYIGEKKPESSGAS
YSSQFSEAFTKFYGQSKATTANEASESSKSREGVHDNCINAIVSLSKAGSPKVMRFSTSG
LDGKIAIWDLENMEEELGHQF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggtggatgttcacaggttcgcagagtcaatcacttgccatgcttggagtcct
gatctctccatggttgcactttgtcctaacaacaatgaagttcatatctataaatcatca
caagagcaagaccagtgggagaggttacacgtcctcgaaaagcatgaccagattgtttct
ggaatagattggagctcgaagtccaacagaatcgtcactgtttcccatgacaggaactcg
tacgtgtggagcttggaaggaggtgaatgggtaccaactcttgttattcttagactcaat
cgtgctgcactctgtgtccaatggagtccaaatgagaacaagtttgctgttggaagtggt
gctaaaactgtttgtatatgctactatgagcaagagaataactggtgggtcagtaaactt
atccggaaacggcatgaatcttcagtcacaagcgttgcttggcatcctaataatattctt
ctggcaacgacatctacggatggaaaatgtcgggtgttttcaacattcatcaaaggagtt
gacacaaaggatccaaaagcaggctcaccggcagaatctaaattcggggagcaaattctt
cagcttgatctttcatattcttgggcttttggtgtgaaatggtctccaagtggaaacacc
ttagcttatgtaggtcatagctccatgatttactttgttgatgacgttggtccttctcct
ttagcccaaagcgttgcatttagagatttgccgcttcgtgatgtcctctttatatctgag
aaaatggtgatagccgttggttatgacagcaacccgatggtcttcgctgcagatgatact
ggaatatggagctttatcagatacattggagagaagaaaccggaatcctcaggtgccagt
tatagttcgcagttttctgaagcatttacgaaattctacggtcagtcaaaggctacaaca
gccaacgaagcttctgagtcctctaaatcacgtgaaggcgttcatgataactgcataaat
gccattgtatctcttagcaaagctgggagtcctaaagtaatgcgattcagcacttcagga
ttggatggcaagatagccatatgggatctagagaacatggaagaagagcttggccaccag
ttttaa
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