KEGG   Brassica rapa (field mustard): 103868089
Entry
103868089         CDS       T03449                                 
Name
(RefSeq) DNA polymerase lambda isoform X4
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03410  Base excision repair
brp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103868089
   03450 Non-homologous end-joining
    103868089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brp03400]
    103868089
Enzymes [BR:brp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103868089
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     103868089
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     103868089
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 HHH_5 NTP_transf_2 BRCT Cdd1 DUF3859
Other DBs
NCBI-GeneID: 103868089
NCBI-ProteinID: XP_009144435
UniProt: M4DPJ3
LinkDB
Position
A8
AA seq 524 aa
MAPKRGRNRSPSPDRNGMFTGMVVFMVDTGVQRRRLQIWKQKLVLMGGAVIEEGSLTKKV
THVLAMTPEALVGKFQKEPLSRFKGRLVRYQWLEDSLTSGEKANEDLYLLKFEEPNKKSL
PSRSGSEDQPSTPKRARNSPDSSDTVGLESQKNTQGSPTSCSVPSTSPSPGEGISETPST
SPQSEPTSVYKPPDLNRNITEIFGKLINIYRALGDDRRSFSYYKAIPVIEKFPTKIESVD
QLKHLPGIGKSLTDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALKLYEK
GHRTLDDLKNEDSLTHAQRLGLKYFDDIRTRIPRQEVQEMEQLLQRVGEEVLPGVDIVCG
GSYRRGKATCGDLDIVITHPDGQSHKGFLTKFVKRLKETNFLREDLIFSTHSEEGTGSGV
DTYFGLCTYPGQELRRRIDLKVYPRDIHAFGFIAWTGNDVLNRRLRLLAESKGYRLDDTG
LFPATHSSSGNRGGRASASMKLSTEKQVFDFLGFPWLEPHERNL
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggcgccaaagcgagggagaaaccggtcgccttctccggaccggaacgggatgttcacc
ggaatggtagttttcatggtggacaccggagtccagcgccgtcgattgcagatatggaag
cagaagctggttctaatgggaggagcagtgatcgaggaaggttcgttgacgaagaaagtc
actcatgttctcgccatgactcccgaagctcttgtcggaaaattccagaaagaacctctg
tctcgttttaaaggacgccttgtgcgttaccagtggttagaagatagtctaacttcagga
gagaaggctaatgaagacttgtaccttctcaaatttgaagagcctaacaaaaagtctttg
ccttcaaggagtggtagtgaggatcaaccatcaactccaaaaagagctaggaactcccct
gattcttctgataccgtaggcttagaaagccaaaagaatacacaaggatcacctactagt
tgtagtgttccctctactagtcccagtcctggagaaggcatttcagagactccctctact
agtccacaatcagagcccacgtcggtttacaaaccgcccgatttgaacagaaatatcact
gagatatttgggaagctgataaacatatatagagctttgggtgacgataggaggtccttt
agctattacaaagctataccggtcattgaaaagtttcccactaagattgaaagcgttgat
cagctcaaacacctccctgggattggaaagtcattgacagatcatattcaagaaatcgtg
acaacagggaagttatccaagttagaacactttgaaacagatgagaaggtacgtacgatc
agtttgtttggggaagtttggggtattggtcctgctactgcactcaagctatatgagaaa
ggacaccgcacattagatgacttgaagaacgaggattcacttacgcatgcgcagaggttg
gggttgaaatattttgatgatattagaacaaggattccacgccaggaggtgcaagaaatg
gaacagcttctacagagagtcggcgaggaagttttacctggtgtggatattgtatgtgga
ggatcatatagacgtgggaaggctacttgcggagatctagatatagttatcacacatcct
gatggacaaagtcacaagggcttcttgacaaagtttgtaaagcgtttgaaggaaacaaac
tttcttagagaagatctcatcttcagtacccacagtgaagagggtactggttcaggcgtc
gacacgtattttggtctgtgcacttatcctggtcaggagctgaggcgccgtattgattta
aaggtttatccgagggatatacatgcattcggattcatagcctggacagggaacgacgtg
ttgaacagaaggctgagattgctagcagaatctaaaggatatagactcgatgatactgga
ctgttcccagctactcacagctcaagtggtaaccggggtggtagagcaagtgccagcatg
aaactctccacagagaaacaagttttcgatttcttagggtttccctggctcgagccacac
gagaggaatctttaa

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