Brassica rapa (field mustard): 103868332
Help
Entry
103868332 CDS
T03449
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X2
KO
K08775
breast cancer 2 susceptibility protein
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03440
Homologous recombination
brp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103868332
03460 Fanconi anemia pathway
103868332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103868332
03036 Chromosome and associated proteins [BR:
brp03036
]
103868332
03400 DNA repair and recombination proteins [BR:
brp03400
]
103868332
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103868332
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103868332
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
103868332
FA (Fanconi anemia) pathway
Downstream FA components
103868332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
DUF4503
Orbi_NS1
Motif
Other DBs
NCBI-GeneID:
103868332
NCBI-ProteinID:
XP_009144690
LinkDB
All DBs
Position
A05:complement(8979261..8987174)
Genome browser
AA seq
1048 aa
AA seq
DB search
MSTWQLLPDSSGDGFRWDAAGRILQSGKSDSPPTTSPPLPSMADLLLRGCSKLIEPEESK
PTMFTTALGKSVALKDSSLSRAKSILSDSDDVALSRESGFGVPNSCFQTASNKKVNVSSA
GMARAKALLGLEEEDDFSVFKHVNHRLPSSHQQHGLRTPETFGAEHRSVTPGGHNVSGKR
CEILSSSPKVPQTKFQTAGGRSLSVSVEALNRARSLLGDPELGPFFDDVDHFVTPQKDKW
IGGDIAHESNKHTSNSFISPLQSSSKQFRSVKLEDVASGVNLIKKFDAAVDETHGNTPLA
SDKAVTNTMGTGFIPRSSQFGRQAHQPLVDITNRNDIAHANSNNRQESSQKKRLGKTVSV
PPFKRPRTSSFKTPLMKNDQHPSNGFSVVSCDTQYSNRVLSTRTEERSQRIYIKDYFGMR
PRATTKMAVPEHVRRIKSSNADKYAFGDVSSSSVVGAETFHQMLAESGASLQCASREWVT
NHYRWIVWKLACYETYYPAKCRGNFLTITNVLQELRYRYEREVNHGHCSAIMRILSGDAP
ASSMMVLCISAINPETRETHGSDSGNNVKIELTDGWYSINAALDVMLRKQLNAGKLFIGQ
KLRILGAGLSGWSTPTSPLEAAISNTIYLLLHINGTYRAHWADRLGFCKEVGVPLALNCI
KCNGGPVPKMLAGITRIYPILYKEKLGEKKSVVRSERMEWRMIELHNQRRSDLIEGLICE
YQGGINGVDSQNDTDSKGAKLFKLLESAAEPDFLMADMSMEELNCFNRYKEKFEAAMEKK
MEKSVAKALEDAGLGERDVTPFMRIRLVGLTSLSYDGHPNPKEAILTIWNPTETQRTELT
EGKIYAMKGLVPMNIDSETLYLHAKGSSSRLQPLSPKASERFQPFFNPRKSMSLLDLGEI
PLGSEFDMAAYVVYVGNAYTDVDQKKQWVFVTDGSLQYSDSGKIANRLLAISFRTSSMDD
LHSPLISHNLVGSVVGFCNLIKRAKDVENDMWVCEAMENSDYFLNADAACPSHLKTSSGH
IQIWANLSFSKSIIDQLRQRALLIVGAC
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagctattacccgattcaagcggcgacggtttccggtgggatgcagct
ggccggattcttcagtctggcaaatccgattctccgccgaccacatctccccctctacct
tccatggcggatctcttgctccgaggatgctcgaaacttatagaaccagaggaatcgaag
ccaacaatgttcacgactgctctgggcaaatctgttgctcttaaagactcttcgctttcc
agagccaaatcgattttatcagattcagacgatgtcgctctctccagggagagtgggttt
ggtgttcccaactcttgtttccagactgcttctaacaagaaggttaacgtgtcttctgct
ggtatggcaagagccaaggcattgttaggactagaagaagaagatgattttagtgtattc
aaacacgtgaaccaccgtttgccttcttcccaccagcaacatgggttaaggactcctgag
acgtttggtgctgagcatcgttctgtaactccaggaggacataatgtatctgggaaaaga
tgtgaaattttgagttcatctccaaaggttcctcaaacaaagtttcaaactgctggtggg
agatcattgtcagtgtcagtcgaagccttgaatcgtgccagaagccttcttggggaccct
gagttagggcctttctttgacgatgttgatcactttgttacaccccagaaagataaatgg
ataggtggtgatattgctcatgagagcaacaagcatacatctaatagtttcatatctcct
cttcaatcttcttcaaagcaattcagatcagtcaaattggaggacgtagcttccggggtt
aatttgatcaagaaatttgatgcggctgttgatgagacacatggtaacacgcctttagca
tctgataaggcagttactaataccatgggaaccggtttcattccaagatcttcacaattt
ggaaggcaagctcaccagccacttgtcgatatcacaaatcgcaatgatatagctcatgct
aacagtaacaatagacaagaaagtagccaaaagaaaagactgggaaagacagtctccgtt
cctccttttaaaaggccgagaacctcctcctttaaaactcctctaatgaaaaatgaccag
catccttcaaatggcttttctgtagtatcttgtgatacacaatattccaatagggtgctt
tctacaagaactgaagaaaggtctcaaagaatatatatcaaggattattttggaatgcgt
ccaagagctacgaccaagatggctgtgccagaacatgtcagacgaatcaaatcaagtaat
gcagataaatatgcatttggtgatgtctcttcttcaagtgtggtgggagctgaaactttt
catcagatgttggcagaatctggtgcttccttacaatgtgcatctagagagtgggtcacc
aatcactacaggtggatagtctggaaactcgcatgctacgagacatactacccagccaaa
tgcagaggaaactttctgacaatcaccaatgtcctccaggaactaagatatagatatgag
agagaggtcaatcatggtcactgctctgcaataatgaggattctgagtggtgatgctcca
gcttcttcaatgatggtgctctgcatatctgctattaatccagagactcgagaaacacat
ggttctgatagtggcaacaatgtgaaaatagaactcactgatgggtggtactcgataaat
gctgctctggatgtcatgctgcgaaaacagctgaatgctggaaaattgtttattgggcag
aagcttcggattcttggggcaggactttctggctggagtaccccaacatcacctcttgag
gcagcgatttcgaatacaatctatttgttgttgcatattaatgggacatacagagctcac
tgggcggaccgactaggattctgtaaagaagttggtgtccctctggctctcaactgtatc
aagtgcaatgggggccctgtgcctaaaatgttagctggaattacacgaatataccctatc
ctatacaaggaaaagttaggtgaaaagaagtcagtagttcgatcagagaggatggaatgg
agaatgatcgagctgcataaccagaggcgctcagatcttatagagggtcttatatgtgag
taccagggaggaatcaatggtgtcgacagccagaacgatactgacagcaaaggagccaag
ctctttaagctgttagagtctgctgctgaacctgatttcctaatggcagatatgagtatg
gaagagttgaactgtttcaatagatataaagaaaagtttgaggcggccatggagaaaaag
atggaaaaatcagttgcaaaagctctggaagacgctggcttaggtgaaagggatgtcact
ccattcatgaggattaggcttgttggactgacgagcttaagttatgatggacacccaaat
ccaaaagaagccattttaacaatctggaatccaacggagacacagagaaccgagttgaca
gaggggaaaatatacgcaatgaaggggctggtaccaatgaacatagattcagaaacactg
tacttacatgccaaaggatctagctcaagattgcagcctttgtctccaaaagcttctgaa
agatttcagccctttttcaacccccgtaaatcgatgtcattgttggatcttggtgaaatt
cctcttggaagtgaatttgatatggcggcgtacgttgtatatgttggaaatgcgtacacg
gatgttgaccaaaagaagcagtgggtgtttgttacagatggatccttacaatattcagat
tcagggaaaatcgcaaacagacttctcgctataagcttcagaacatcatccatggatgac
ctccacagccccctcattagccataatcttgtcggatctgtggtagggttctgcaatcta
ataaaaagagccaaggatgtggaaaacgatatgtgggtttgtgaggcgatggagaactcg
gactacttcttaaacgcagatgctgcttgcccttctcaccttaaaaccagcagtggccat
atccaaatatgggctaacctctctttttctaaatccatcatcgaccaacttcggcagaga
gccctacttatcgtcggtgcttgttaa
DBGET
integrated database retrieval system
