KEGG   Brassica rapa (field mustard): 103868443
Entry
103868443         CDS       T03449                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103868443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103868443
   03041 Spliceosome [BR:brp03041]
    103868443
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103868443
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103868443
Spliceosome [BR:brp03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103868443
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 103868443
NCBI-ProteinID: XP_009144782
UniProt: M4FAJ9
LinkDB
Position
A05:10313585..10316580
AA seq 414 aa
MDMLKKRRLDENGIGLLNDGHVTTISTRLTPHDARKIIDRFSNDQLLDILQEAVARHPDV
LELVRSTADSDISQRKLFIRGLAAETTTEGLRSLFSTYGDLEEAIVILDKVTAKSKGYGF
VTFKHVDGALLALKDPSKKIDGRVTVTQLAAAGNQGTTAHVSDISTRKIYVANVPFEMPA
DRLLNQFLAYGDIEEGPLGFDKVTGKSRGFALFVYKTSEGAQAALADPTKVVDGKHLQCK
LAIDGKKGKPPGQDGGAGPGGHGQGDGMGMVPPPGPYAGAHGGPGGMGPYGGYSGGPPPH
HMNSTPSSMGGAAAPAGGGGYGGAYAGHYGGYVGAGSGGYGSMSGAGGGYGGPGGGSGPY
RMPPSSMSGGGYPESGHYGHSSASAYPGQHPPVGSSTVPRIPLGGMYPNGPPNY
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggatatgttgaagaagcgacgtctcgacgagaacggcatcgggctcctcaacgacgga
cacgtcaccacaatctcgactcgattaaccccacacgacgctcggaagatcatcgaccga
ttctccaacgatcagcttctcgacatcttacaagaggccgtcgctcggcaccccgacgtt
ctcgagctcgttagatcaaccgccgactccgacatctctcagaggaagctcttcatccgc
ggcctcgcggcggagaccacgacggaaggcctccgatcgcttttctccacgtacggagat
ctcgaggaagcgatcgtgattctcgacaaggttacggcgaaatcgaaagggtacgggttc
gtgacgttcaagcacgtggacggagctctcctcgctttgaaggatccgtccaagaagatc
gacgggcgcgtgacggtcacgcagctcgcggcggcggggaatcaagggacgacggcacat
gtttcggatatatcgacgaggaagatatatgtggcgaatgtgccgtttgaaatgcctgcg
gataggttgttgaatcagtttcttgcttatggagatatcgaagaagggcctttgggtttt
gataaagttactgggaagtcacggggttttgctttgtttgtgtataagacttctgaaggt
gctcaggctgcgcttgctgatcctacaaaggttgttgatgggaagcatctgcagtgtaag
ttggctatagatgggaagaaaggaaagccgcctgggcaagacggtggtgctgggcctgga
ggacatggtcaaggtgatggaatggggatggtgcctcctcctgggccttatgctggtgct
cacggtggacctggtgggatgggtccttacggtggttactcgggaggaccaccgccgcat
catatgaattccacaccatcttctatgggtggtgctgctgctcctgctggaggaggtggt
tatggaggtgcgtatgctggtcattatggtggatacgttggtgcaggatctgggggttat
ggatcaatgagtggtgccggtgggggttatggtgggcctggtggtggaagtggtccgtat
agaatgccgccgagttcgatgtctggtggtggttatccagagagtgggcattatgggcat
tcgtcagcttcagcatatcctggacagcatccgcctgttggttcctccacagtgccgaga
attcctcttggaggaatgtaccccaacggtccaccaaattactga

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