KEGG   Brassica rapa (field mustard): 103868515
Entry
103868515         CDS       T03449                                 
Name
(RefSeq) ras-related protein RABG3d
  KO
K07897  Ras-related protein Rab-7A
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04142  Lysosome biogenesis
brp04144  Endocytosis
brp04145  Phagosome
brp04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103868515
   04145 Phagosome
    103868515
   04142 Lysosome biogenesis
    103868515
   04148 Efferocytosis
    103868515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103868515
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103868515
   04031 GTP-binding proteins [BR:brp04031]
    103868515
Membrane trafficking [BR:brp04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    103868515
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103868515
  Exosomal proteins of other body fluids (saliva and urine)
   103868515
  Exosomal proteins of colorectal cancer cells
   103868515
  Exosomal proteins of bladder cancer cells
   103868515
GTP-binding proteins [BR:brp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    103868515
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 RsgA_GTPase Septin nSTAND3 AAA_16 cobW ATPase_2 PduV-EutP AAA_7 NACHT AAA_24 AAA_22 ABC_tran NTPase_1 RNA_helicase SRPRB AAA_14 CATSPERZ_C MCM AAA_5 ATP-synt_ab TniB
Other DBs
NCBI-GeneID: 103868515
NCBI-ProteinID: XP_009144857
UniProt: A0A397ZJD8
LinkDB
Position
A05:10865443..10867241
AA seq 206 aa
MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQAAPSDPDNFPF
VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE
PEEEPYLPDTIDVAGGQQHRSTGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcttctcgcaggagagttcttcttaaggttatcatcctcggcgatagcggggttggg
aagacatcgttgatgaatcagtttgtgaatcgcaagtttagtaatcagtacaaagctacg
attggagctgatttcttgactaaagaggttcaaattgatgaccgcatcttcactttacag
atttgggatactgctgggcaagaaagattccaaagcttgggagttgcgttctacagagga
gctgactgttgtgttcttgtgtacgatgtcaatgttatgaaatctttcgagaatcttaat
aactggagggaagagttcttgattcaggctgctccatcagatcctgacaacttcccgttt
gtcgtcttggggaacaagaccgatgttgatggtggcaaaagccgagtggtttctgagaag
aaagcaaaagcttggtgtgcatctaaaggaaacattccttactttgagacatctgccaaa
gaaggattcaacgtagacgccgcttttgagtgcatcaccaaaaatgccttcaagaatgaa
cctgaagaagaaccgtacctacccgacaccattgatgttgctggaggtcagcaacacaga
tcaacagggtgcgagtgctaa

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