Brassica rapa (field mustard): 103868564
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Entry
103868564 CDS
T03449
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
brp03015
mRNA surveillance pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103868564
09122 Translation
03013 Nucleocytoplasmic transport
103868564
03015 mRNA surveillance pathway
103868564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103868564
03041 Spliceosome [BR:
brp03041
]
103868564
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103868564
Spliceosome [BR:
brp03041
]
Complex C
Other components
EJC/TREX
103868564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
103868564
NCBI-ProteinID:
XP_009144897
UniProt:
M4ENR6
LinkDB
All DBs
Position
A05:11226672..11228260
Genome browser
AA seq
200 aa
AA seq
DB search
MANIESEAIDFEPEEDDLMDEDAGAADVSPRAAAHPRLRSAIAGANGDSTDRKTKGRGFR
EERDSDRHRRLSSRDFDSLGSDGGPGPQRSIEGWIILVTGVHEEAQEDDLSNAFGDFGEI
KSLHLNLDRRTGFVKGYALVEYDKSEEAQNAIKAMNGAELLTQNVTVDWAFSSGPSAGSY
RRKNLRSGRSQRSRSPRRRF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatagaatccgaagcaatcgatttcgagccagaggaggatgacctcatggac
gaagatgctggagcagctgacgtttccccacgcgccgctgcgcatccgaggcttaggtca
gctatcgccggagccaacggcgattccacggataggaagaccaaaggccgcggctttcgc
gaggagagagactccgatcgccaccgccgcctttcctcgcgcgatttcgactcgctaggt
tccgacggcggtcctggcccccagcgatctattgagggctggattattttggtcaccgga
gttcatgaggaggcacaagaggatgatctatcgaatgcttttggtgattttggggagatt
aagagtttgcatctcaatctcgatcgccgtactggttttgtcaagggctatgctttggta
gaatatgacaagagtgaagaagcacagaatgctatcaaagcaatgaatggtgctgagctt
cttacacagaatgtcaccgttgactgggccttcagcagtggacccagtgctggatcttac
aggagaaagaacttgaggtctgggaggtcacaacgttcaagaagcccgagaagacgtttc
tga
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