Brassica rapa (field mustard): 103868618
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Entry
103868618 CDS
T03449
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103868618
Membrane trafficking [BR:
brp04131
]
Protein recycling
Others
EARP complex
103868618
Endosome - Golgi transport
Tethering complex
GARP complex
103868618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
RINT1_TIP1
XhlA
EXOC6_Sec15_N
DUF7201
MPH2
Motif
Other DBs
NCBI-GeneID:
103868618
NCBI-ProteinID:
XP_009144952
UniProt:
M4ENW6
LinkDB
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Position
A05:11889871..11897993
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AA seq
824 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIHGEIRRVDASILSAVRQQSNSGTKAKEDLA
DATRAVEELSYKIQEIKSKAEQSEAMVQEICRDIKKLDFAKKNITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCNHFEAYRDVPKIMELREKLNNIKQVLKSHVFSD
FSSLGTGKETEETNLLQQLSDSCLVVDALESSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRIRTNEEIWKIFPASWHVPYRLCIQFCKKTRKQVESILVNMKEKPEV
ATLLLALQRTVEFEKELEKKFGGDVPTSDIGDDIEEIGTWENNSQNISKIRKKYEKKFAA
GQESGENEKTGNKDLSAPGAGFNFRGIISSCFEPHLTPYIELEEKTLMERLEKVVQEETW
DIEDGSQNNVLHSSTQLFSDIKKSLKRCSVLTKNQTLFNLFKVFQRVLKAYATKLFLKLP
KGGTGIVAAATGMDGQIKVSDRDERVICYIVNSAEYCHKTSGELAEKVSEIIDPHYAEGV
DMSEVQDEFSAVITKSLVTLVLGIETKFDNEMAAMTRVPWGTLDSVGDQSGYVNGINTIL
SSSIPVLGNLLTPVYFQFFLDKLASSLGPRFYANIFRCKQLSETGAQQMLLDTQAMKTIL
LEIPSLARQTSTAASYSKFVSREMSRAEALLKVILSPIDSVADTYRALFPEGTPMEFQRI
LELKGLKKADQQSILDDFNKHGPGLTQPSVSTAMRQPVPTTPAPPMAITNQATAAGFIAN
SEDVLTRAAALGRGAATTGFKKFIALTEAAKDRKDGPLRRLFNA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggataagtcgagtgcgttggagtatatcaaccagatgttcccaacagaagcatcgcta
tctggcgttgagccgcttatgcaaaagattcatggtgagattcgccgggttgatgctagc
attctttctgctgttcgtcaacagagtaactccggaactaaagcgaaagaagatcttgct
gatgctacgcgtgctgtggaggaactctcctataagattcaagagattaaatccaaagct
gagcaaagtgaagcaatggtgcaagaaatatgccgtgacattaagaagttagattttgca
aaaaagaacataaccacgaccatcactgctcttcatcgtctcacaatgttagtctctgct
gttgaacagcttcaggtgatggcgtcaaaaagacaatacaaggaggcagctgcacagctg
gaggccgtaaaccaattatgtaatcacttcgaagcgtatagggatgttcctaaaatcatg
gaactgagggaaaagcttaataatattaagcaagtcctcaagtctcatgtattttctgat
ttttcgagtttaggtaccgggaaagagacagaggaaacaaatttgctacaacagttatct
gattcttgtttggttgttgatgctctggagtcatctgtcagggaagagttggtaaacaac
ttctgtagccgggagctaacctcatatgaacaaattttcgaaggagctgaattggcaaag
ctggataaaacagagcggagatatgcatggataaagcgtcgaatccgtacaaatgaagaa
atttggaagatttttcccgcttcttggcatgtgccttatagactttgcatccagttctgc
aagaaaacaaggaaacaagtagaatctattctggtcaacatgaaagagaaaccagaagta
gcgacattgttactggcactacaaaggacagtggagtttgaaaaggaacttgaaaagaaa
tttggtggtgatgttcctactagtgatatcggagatgacattgaagaaattggtacatgg
gaaaacaatagtcagaatatatccaaaattcgcaagaagtatgaaaagaaatttgctgct
ggtcaagaatccggggaaaatgaaaagaccggaaacaaagatttatctgctcctggagct
gggttcaatttccgtggaattatctcttcttgcttcgaacctcatttaaccccatatatt
gagttggaagagaagacacttatggaacgcctggagaaagttgttcaagaggaaacatgg
gatattgaggatggaagtcaaaataatgttttacatagcagcactcagttatttagcgac
ataaagaagagcttgaaacggtgcagtgttctcactaagaaccagactttattcaatttg
ttcaaggtctttcaacgagttctgaaggcatacgctacaaagctatttcttaagctccct
aaaggaggcaccggtatcgttgctgcagccacaggcatggacggacagataaaggtctct
gatagagatgaaagggtgatatgttacatagttaattctgccgagtattgccacaaaaca
tctggtgaattggcagaaaaagtctcagaaattattgacccgcattatgctgaaggcgta
gacatgtcagaggtccaggatgaattttctgccgttataacaaaatcattggtgacgctg
gtccttggaattgaaactaaatttgacaatgaaatggcagcaatgacacgtgttccatgg
ggaacacttgacagtgtgggtgaccagtctgggtacgtgaatggaataaatacaatttta
agcagcagtattcctgtccttgggaacctcttaacaccagtgtacttccagttcttcctt
gacaagctggcatcatcccttggaccacggttctatgctaatattttcagatgcaagcaa
ctatccgaaactggagcccaacagatgttactagatactcaagccatgaagacgattctt
ctagaaattccttcccttgccagacagacttcaactgctgccagctattccaagtttgtg
agccgtgaaatgagccgagctgaagcactccttaaggtcatactctctccaatcgattca
gtggctgacacttaccgtgcactgtttccagaaggaactcccatggagtttcagcgcatc
ttggagcttaagggccttaagaaagctgatcagcagagtatacttgatgatttcaacaag
catggcccaggacttacacagccctctgtttcaactgcaatgcgacaacccgttccaacc
acacctgcaccgccaatggcaatcactaatcaggctacggccgctggattcatagcaaac
agcgaggacgtgttgacgagagcagcggctcttggcagaggagctgcaaccactggcttt
aagaagttcattgctcttactgaagctgccaaagaccgcaaagatgggcctttaaggaga
ctcttcaacgcctga
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