Brassica rapa (field mustard): 103868651
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Entry
103868651 CDS
T03449
Name
(RefSeq) long chain acyl-CoA synthetase 2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00061
Fatty acid biosynthesis
brp00071
Fatty acid degradation
brp01100
Metabolic pathways
brp01212
Fatty acid metabolism
brp04146
Peroxisome
Module
brp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
103868651
00071 Fatty acid degradation
103868651
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103868651
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
brp01004
]
103868651
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103868651
Enzymes [BR:
brp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
103868651
Lipid biosynthesis proteins [BR:
brp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
103868651
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of breast milk
103868651
Exosomal proteins of breast cancer cells
103868651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
103868651
NCBI-ProteinID:
XP_009144978
UniProt:
M4EU02
LinkDB
All DBs
Position
A05:complement(12750268..12755200)
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AA seq
666 aa
AA seq
DB search
MAAAADHVVIMEEGRQATAEHPSAGPVYRCKYAKDGLLDLPADLDSPWQLFSEAVKQYPN
EQMLGRRVTVDSKVGPYTWITYREAHDAALRIGSAIRSRGVNPGNCCGIYGSNCPEWIIA
MEACMSQGITYVPLYDSLGVNAVEFIINHAEVSLVFVQEKALSSILACRKGCSSNLKTIV
SFGEVSITQKEEAENQCVSLFSWHEFLLMGNSDETTLPRKQKTDICTIMYTSGTTGEPKG
VILSNAAIMVEVLSIDKMLQVTDRSCDTSDLFFSYLPLAHCYDQVMEIYFLSRGSSVGYW
RGDIRYLMDDVHALKPTVFCGVPRVYDKLYAGVMQKISAGGLIRKKLFDLAYNYKLGNMR
KGLSQEEASPRLDRLMFDKIKDALGGRAHMLLSGAAPLPRHVEEFLRIIPASNLSQGYGL
TESCGGSFTTLAGVFSMVGTVGVPMPTVEARLVSVPEMGYEAFSGDVARGEICLRGNSMF
SGYHKRQDLTDQVVINGWFHTGDIGEWQEDGSMKIIDRKKNIFKLSQGEYVAVENLENTY
SRCPLIAQIWIYGNSFESFLVAVVVPERKAIEDWAKLNNQSSPNDFESLCQNLKAQKYFL
DELNSTAKQYQLKGFEMLKAVHLEPNLFDIERDLITPTFKLKRPQLLKHYKSIIDQLYTE
AKASRA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagctgctgatcatgtggtgataatggaagaaggacggcaagccaccgcagag
catccatcggcaggaccggtttatcgatgtaaatacgctaaagatggcctcctcgatctt
cctgctgatcttgattctccttggcagctatttagtgaggctgtgaagcaatatccgaat
gagcaaatgttaggccggcgcgtaacggttgattccaaggtcggtccatacacatggatc
acatatagggaagctcacgatgctgcattgcggattggatcagcaatcagaagccgaggc
gttaatccgggaaactgttgtggaatatacggatctaattgtccagaatggattatcgcg
atggaggcctgcatgagccaagggataacttatgtacctctatacgacagtttaggtgta
aacgctgtagagttcatcatcaaccatgccgaggtttcgctggtattcgttcaagagaag
gcactttcctccatcttagcatgccgcaagggatgttcttcgaatttgaagactattgtg
agctttggtgaagtctcgattactcaaaaggaagaagctgagaaccaatgtgtttcgtta
ttttcttggcatgagttcttactaatgggaaactcggatgagacaacacttcctcgtaag
caaaaaacagacatatgcacaataatgtacacaagcgggacgacaggagagcccaaaggt
gtaatcttaagcaatgcagcgattatggtcgaagttttatccattgataaaatgcttcaa
gtcaccgatcgatcgtgcgacacaagtgatttgtttttctcgtacttgccattagcacat
tgttatgatcaagtcatggagatctactttttatccagaggctcctctgttggatactgg
cgtggcgacattcggtacttgatggatgatgttcatgcactgaaaccaactgtgttttgc
ggtgttccacgagtttacgacaaactctatgctggtgtaatgcaaaaaatctcagctggt
ggtttgatacgcaagaaactcttcgatttggcttataactataaattggggaatatgaga
aaaggattgtctcaagaagaagcttctcctcgtctagacagacttatgttcgataagata
aaagatgcattaggaggaagagctcatatgttgttatcaggtgcagcacctttacctcgt
catgtagaggagttcttgagaatcatccctgcctctaatctctctcaaggttatggattg
actgagagttgtggagggagcttcacgactttagcaggagtattttctatggtggggaca
gtgggtgtgccaatgcctacggtggaggcaaggctagtttctgtaccagagatgggttat
gaagctttttccggggatgtggctagaggagagatttgtcttagaggaaattcaatgttc
tctggttaccacaaaagacaagacctaactgatcaagtcgtgatcaatggatggttccac
acaggagatattggggaatggcaagaagatggatcgatgaagatcatagataggaagaag
aacatcttcaagttgtctcaaggtgaatatgttgctgtcgaaaacctcgagaacacttac
tcaagatgccctctcattgctcagatatggatctatggaaacagtttcgagtcttttctg
gtagcagtggttgtacccgagagaaaggctattgaagattgggctaaacttaataaccaa
tcatctcccaatgattttgaatctctatgtcaaaatctcaaagctcaaaaatacttcttg
gatgagcttaactctaccgcaaagcaataccaacttaaagggttcgaaatgttaaaagcg
gttcatttggaaccaaaccttttcgatattgaaagagatcttataactccaactttcaag
ttgaaaaggccacagctcctcaaacattacaagagcataattgatcaactttacaccgaa
gcaaaggcgtccagagcatag
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