Brassica rapa (field mustard): 103868684
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Entry
103868684 CDS
T03449
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103868684
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103868684
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HARP
Motif
Other DBs
NCBI-GeneID:
103868684
NCBI-ProteinID:
XP_009145015
LinkDB
All DBs
Position
A05:13234969..13240385
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AA seq
661 aa
AA seq
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MDDDDFDLTMEEMDALEKEALERINQNKVPNLSQGSRSLPSSLAPKPNTASAPKGEGVKV
PVKILLHHSGDLAAKFPYNQSVVDAVRKIPMALWNAKERLWIFPQSSLSSAENILRQVSS
VKVEVENLDPLVQRAIASASRVPDLRHLYDKIPSHIEPKLLPFQRDGIEFILQHGGRVLL
ADEMGLGKTLQAIAVTTCVQESWPVLIIAPSSLRLHWATMIHQWLHVPPSDIVVVLPQPG
GSNKCGFTIVSSNTKGTIHLDGVFNIISYDVVTKLDKLLMALDFKVVIADESHFLKNAQA
KRTTATLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYRNVHEYGSRYCKGGVFG
IYQGASNHEELHNLMKATVMIRRLKKDVLSELPSKRRQQVFLDLAEKDMKQINALFRELK
VVKAKIKDCMSEDDIKSLKFTEKQLINKIYTDSAEAKIPAVTDYLGTVLEAGCKFLVFAH
HQSMLEALHQFLKKKKVGCIRIDGSTPASSRQALVSDFQGNDEIKAAVLSIRAAGVGITL
TAASTVIFAELAWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLENL
GQMLDGQENALEVSSSHVMNSPLKPRNSPSKQQTLDPFLKRCKRSLYDDTEEHPTPKVPR
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatgactttgatttgacgatggaagagatggatgcccttgaaaaagaagct
cttgagagaatcaaccagaacaaggttcctaatttatctcaagggtccagaagcttacct
tcatctctcgcccctaaaccaaacactgcctctgcgccaaaaggtgagggcgttaaggtc
cctgtgaagattttgctgcatcatagtggagatcttgctgcaaagttcccctataaccag
tcggtggtggatgctgtgcgtaaaatccctatggctctttggaatgctaaagaaaggtta
tggatctttcctcaatcttcattgtcatcagcagaaaatattctacgacaagtttccagc
gttaaagttgaggtagagaacttagatcctcttgtgcaacgtgcaatagcttctgcctca
agagttccagatctacggcatctgtatgacaagataccaagccacattgagccaaagctt
cttccgtttcagcgagatggcatagagtttatattgcagcacggagggcgtgtgctccta
gcggatgaaatgggtctgggaaagactctgcaggcaattgctgtgactacatgcgttcaa
gaatcttggccagttctgattattgcaccatcttccttacgtttacattgggcaacgatg
attcaccaatggctgcatgtacctccgtcagacatagttgtagttttaccgcaaccaggt
ggatcaaacaagtgcggatttactatagtttcctcgaatacaaagggcacaatccatctt
gatggtgtcttcaacattatctcttacgatgtggtcaccaaactggacaaactcctgatg
gcgttggactttaaggttgtcatagcagatgaatcacattttcttaaaaacgctcaagca
aagaggacaactgctacccttccagtcataaagaaagctcaatatgcaatcctactgagt
ggaactcctgctttatctagaccaatagagctattcaaacagctggaagctctataccca
gatgtatatagaaatgttcatgaatacggtagcagatactgcaaaggcggagtttttgga
atatatcaaggcgcaagcaatcatgaagagttgcacaatttgatgaaggcaacagtaatg
attcgaagacttaaaaaggatgtcttgtctgaacttccgtcgaaacgaagacagcaggtc
ttcttagatttagccgagaaagacatgaagcaaatcaatgctttgtttcgtgagctaaag
gttgtaaaggcaaaaattaaggattgcatgtcggaagatgacatcaaatctcttaaattt
acagagaagcaacttatcaataagatctacactgattccgctgaagccaaaatcccagca
gtgactgattatctaggaactgtgcttgaggctggttgcaaatttctagtatttgctcat
catcagtccatgcttgaagcattacaccagtttctaaaaaaaaagaaagtgggctgcatc
cggattgatggaagtacccctgcctcctctagacaagcattggtttcagactttcagggg
aacgatgagataaaagcagcagtactgtcaatacgagctgctggtgttgggataactttg
acagcagcaagcactgttatctttgcggagttggcatggactccaggtgacctgatacag
gcagaagatcgtgcacataggattggtcaagtctcctcagttaacatacactaccttcta
gcaaatgacactgttgacgacatcatctgggatgtcgttcagagcaagctggagaatcta
ggacagatgcttgatggacaagagaatgctctggaggtttcatctagtcatgtgatgaac
agtccactaaaaccgagaaacagcccctcgaagcagcaaactctagacccgttcttgaag
cgctgcaagagatcattatatgatgacactgaagaacatccgacgcctaaagttcccaga
aactga
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