Brassica rapa (field mustard): 103868925
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Entry
103868925 CDS
T03449
Name
(RefSeq) BUD13 homolog
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103868925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103868925
Spliceosome [BR:
brp03041
]
Complex B
Other components
RES complex
103868925
Complex C
103868925
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Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
103868925
NCBI-ProteinID:
XP_009145225
UniProt:
M4EYH8
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All DBs
Position
A05:complement(17768346..17771359)
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AA seq
548 aa
AA seq
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MAASRTGVKSMKDYLKKYESSEVIEKKKKKPSKPEPTGVLVVDEDPVWQKQVDPHEEDNE
NYSAEERPVVDEDIEVKRMRRLEEIKARRAQNAIAEDGSGWVSLSSDPQRSDDISPPRRH
RTRNDSPSPEPGGSRGSLPETDMSPPRRRKRHYTPSPEPNRLHAKPVSLDSDLTPPRKRR
ARNDSPSPEPEDPAPKSLGEDLSPPRKRRVHPVSPERSRKRSDSLELDGDLSPPRRKKDS
LVSDVNKRSNDLSPPRRRRYHSPSPEPGRRPSKSLGSNSDLSPPRRSVSVKGSRDSDLSP
QRKPVSRSSNFDSSPPRRPRRESPPPQTSKEQRKTGLISGKDIGSEYRKKKQDEQLRFKN
MDSELTGQNAEAVFRDKITGKRISKEEYLQSKQKKVIEKPKEIKLEWGQGLAQKRDAEAR
LQELELEKDKPFARTRDDPELDQMMKERVRWGDPMAHLVKKKQYEAPLMDLGDNEEMKKS
GFVIPQSIPKHSWITRGLEAAPNRYGIKPGRHWDGVDRSTGHEKDRFKKTSEKKATESEA
YLWSVADM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcaagaacaggggtgaaatctatgaaagattacttgaagaagtatgaaagt
agtgaggttatagaaaagaaaaagaagaagccttccaagcctgaacccactggtgtttta
gttgtggatgaagatcccgtttggcagaagcaggttgatccccacgaggaagataatgaa
aattattcagctgaggaaaggcctgtggttgacgaggacattgaggttaagagaatgagg
aggttggaggaaatcaaggcaaggcgtgcccaaaatgccattgctgaggatgggagtggg
tgggtgagtttatcttcagacccccaaagatctgatgatatttctcctccaaggagacac
aggactcgtaacgactctccatctcctgagcctggtgggtctaggggttcacttcctgaa
acagacatgtcaccaccacgtcggagaaaacgtcattatacaccttcccctgaacctaac
agactacatgccaagcctgttagtttggattctgatttgacaccacctcgcaaaagacga
gccaggaatgattctccttcaccagaacctgaagatccagcccccaaaagtctgggtgaa
gatctgtctcctcctcggaagagacgtgttcatcctgtatcgcctgaaagaagcagaaag
cgttcagattctcttgagttagacggtgatttatctccccctcgcaggaaaaaggattca
cttgtctcagatgttaacaaaaggagcaatgatctttctcctccacggagaagacgatat
cattctccatcacctgaacctggtagaaggccttcaaaatctcttggctccaactctgat
ttatctccaccacgcaggagtgtgagtgtgaagggttcccgagactcggatctttcgcct
caaaggaaacctgtgtcgaggagttccaattttgatagctctccaccaaggagaccgcgc
agagaatcaccacctccccaaacaagcaaggagcaacggaagactgggctaattagtggc
aaagacattggaagtgaatatcgaaagaagaagcaggatgaacagctgaggtttaaaaat
atggattccgagctaactggtcagaatgcagaagcagtgttccgtgacaagattacaggg
aagcgtatatcgaaggaggaatatcttcaatcaaagcaaaagaaagtgatagagaagcca
aaggagatcaaattggaatggggccaaggtttagctcagaagcgtgatgctgaagctaga
ctacaggaacttgagcttgagaaggataagccatttgctcggaccagggatgatcccgag
cttgatcaaatgatgaaagaaagagttagatggggagatccaatggctcatttggtgaag
aaaaagcagtacgaggcacctcttatggatcttggagacaacgaggagatgaaaaaatct
ggatttgtaataccacaaagtatcccaaagcacagctggataacaagaggattagaagct
gcacctaatcggtatggaatcaaacccggtagacattgggatggagttgaccgcagtact
ggacatgagaaggacaggtttaagaagacaagtgagaaaaaagcaacggaaagtgaagcg
tacctttggtctgttgctgatatgtga
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