Brassica rapa (field mustard): 103868951
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Entry
103868951 CDS
T03449
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103868951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103868951
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Pre-60S particles
GTPases
103868951
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
SRPRB
EFG_IV
Spectrin
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
103868951
NCBI-ProteinID:
XP_009145247
UniProt:
A0A3P5YXW1
LinkDB
All DBs
Position
A5
Genome browser
AA seq
1012 aa
AA seq
DB search
MDECDGRKIRNICILAHVDHGKTTLADHLIASSGDGELLKPRLAGKVRYMDYLDEEQRRA
ITMKSSSISLRYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVL
RQAWIEKLTPCLVLNKIDRLICELRLSPMEAYTRLIRIVHEVNGIVSAYKSEKYLSDVDS
ILASPSGEITDESLELLEDDEEVTFQPQKGNVVFVCALDGWGFGVSEFANFYASKLGAKA
ETLQKSLWGPRYYFPKTKMIVGKKSLSAGSKIKPMFVQFVLEPLWEVYEAALDPGSDRAV
LAKVIKSFNLNIPQRELQNKDPKNLLQSVMSRWLPLSDAVLSMAVKHLPDPISAQAYRIP
RLVPERKVIGGNDADSSVLAEAEHVRRSIEACDSSRDSPCVVFVSKMFAMPMKMIPLGGD
HRERMNGLNDDDSKSESDECFLAFARIFSGVLRAGQRVFVISALYDPLKGESSQKYIQEA
ELHSIYLMMGQGLKPVNEVKAGNVVAIRGLGPYISKSATLSSTRNCWPLASMEFQVSPTL
RVAIEPSDPSDMSALMKGLRLLNRADPFVEITVSARGEHVLAAAGEVHLERCIKDLIDRF
ARVNIEVSSPLVSYRETIEGDGSNLLESLRSLSLNASDYVEKRTPNGRCVIRVHVMKLPH
SLTKLLDESTDLLGDIIGGKGSHSIKILESQSPSLEENVDPIEALKSQLVEAGVSSSSET
ENDREKCKAEWAKLLKRIWALGPREKGPNILFAPDGRRICEDGSILVRGSPHVSQRLGFT
EDSTETPPDSALYSEALTLESSIVSGFQLATASGPLCDEPMWGLAFTIESHLAQDSETEK
QPENFGIFTGQVMTAVKDACRAAVLQTNPRIVEAMYFCELNTAPEYLGPMYAVLSRRRAR
VLKEEMQEGSSLFTVHAYVPVSESFGFADELRKGTSGGASALMVLSHWEMLEEDPFFVPK
TEEEIEEFGDGASVLPNTARKLINAVRRRKGLHVEEKVVQHATKQRTLARKV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtgtgatggtaggaagattaggaacatttgcatcttagcacacgtagaccac
ggtaaaacaactctcgctgaccacctcattgcttcctccggtgacggtgagctgcttaaa
ccgaggctagctggtaaggttaggtacatggactatctcgatgaagagcagcgccgtgct
atcaccatgaaaagctcctcgatttctcttcgctacaaggactattctctcaatctgatt
gactcccctggacacatggacttctgtagtgaagtctctacagctgctcggcttagtgat
ggtgctttggttctggttgatgctgttgaaggtgtacacattcagacccatgctgtgttg
cggcaagcttggattgagaagctcactccttgcttggtgcttaacaagattgataggctg
atttgtgagttgaggttgagtcccatggaagcctatactcgtttgattaggattgttcat
gaggttaatgggattgtgagtgcgtataagtctgagaagtatttgtctgatgttgactct
atacttgcgagtccttcaggtgagattactgatgagagtcttgagttgttggaggatgat
gaagaggttacgtttcagcctcagaagggtaatgtcgtctttgtgtgtgctttggatgga
tggggttttggggtctctgagtttgctaatttctatgcttccaagcttggagctaaagcg
gagacgttgcagaaatcattatggggtcctcgttattattttcctaagacaaagatgatt
gtagggaagaagtctttaagtgcgggaagcaagataaaaccaatgtttgtgcagttcgtg
cttgagcctttgtgggaggtttacgaggctgcactagatcccggcagtgatagagctgtt
ctcgcgaaagttatcaaatcttttaacttgaatattccacaacgcgagcttcagaacaag
gatcctaaaaacttgcttcaatcagtgatgagccgttggcttcctttgtctgatgcagtc
ttgtctatggctgtgaaacatctgccagaccccatttcagcacaggcatatagaatccca
cgcttggtcccagaaagaaaagttataggtggtaacgatgctgattcaagtgtccttgca
gaagcagagcatgttagaagatcaattgaggcttgtgactctagccgtgactccccctgt
gttgtgtttgtatctaaaatgttcgctatgcccatgaaaatgatacctctgggaggagac
cacagggagaggatgaacggtttaaatgatgacgacagtaaaagcgagtcggatgagtgt
ttccttgcatttgccaggatctttagcggtgttcttcgcgccggacaaagggtctttgtg
atttccgctctatatgatcctctcaaaggcgaatcgtctcagaagtacattcaagaagca
gaactccactcaatctatcttatgatgggacaaggtttaaaaccagtaaacgaggtgaaa
gctgggaatgtagtggccataagagggcttggaccatatatatcaaaaagcgccacactt
tcatctactagaaactgctggcccttagccagcatggagtttcaggtctctcccactctt
agagtggcgattgagccatcggatccttcagatatgagtgctctgatgaaaggtctaaga
cttttgaaccgagcagatccttttgtggagatcacggtgtctgctcgaggagaacatgtg
cttgctgctgctggagaagttcatctagaaagatgtatcaaggatttgatagacagattt
gcaagagtgaacattgaagtctcttcgcctctcgtttcctacagggagacaattgaaggt
gatggctctaatcttttggaaagtttgagatctctgagcttgaatgcgtcggattacgtt
gagaagagaactccaaacggcagatgcgttatcagagtacacgtcatgaaactaccacac
tccctaaccaagctgcttgatgagagcactgacttgcttggtgacattattggaggcaaa
ggcagtcatagtattaagatactagaatctcaaagccctagcctcgaagagaatgtggat
cccattgaagcattaaagagccagttagttgaagctggcgtttcttcaagctctgaaacc
gagaatgatcgtgagaagtgcaaagctgagtgggcgaagttgctcaagaggatatgggcg
cttggtccaagagagaaaggtccaaacatactatttgctccagatggtagaagaatctgc
gaggatggatccattctcgtgagaggctctcctcatgtctctcagagacttggcttcaca
gaagattctactgagacaccacctgactcagcattgtacagtgaagctcttactctcgaa
agcagcatagtctcggggtttcagctagctacagcatcaggacctctatgtgatgaacca
atgtggggattagctttcaccattgagtctcatctcgcacaagattcagaaacagagaaa
caacctgaaaactttggaatattcacaggacaagtcatgacagctgtcaaagacgcatgt
agagccgccgtgcttcagacaaatccacggatcgtggaagctatgtacttctgcgagcta
aacacagcaccggagtatcttggtcccatgtacgccgttctgagcagaagacgagctaga
gttctcaaggaagaaatgcaagaagggtcgtctctgtttacagtccatgcctacgtgccc
gtttctgaaagtttcggttttgcagacgagctgagaaaaggaacgtcaggtggtgcgagt
gcgctgatggttctgagccattgggaaatgcttgaggaagatcccttctttgttcccaaa
actgaagaagagattgaagagtttggtgatggagcaagcgtccttcccaacacggcgagg
aagctcatcaacgccgtgagacgcaggaaagggttacacgttgaggagaaagtggttcaa
cacgccactaaacagagaaccttggctcggaaagtttga
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