Brassica rapa (field mustard): 103869280
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Entry
103869280 CDS
T03449
Name
(RefSeq) polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM
KO
K11462
polycomb protein EED
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103869280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103869280
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103869280
PRC2.2
103869280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_Vps41
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
PQQ_3
Invas_SpaK
Motif
Other DBs
NCBI-GeneID:
103869280
NCBI-ProteinID:
XP_009145589
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All DBs
Position
A05:19895199..19903424
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AA seq
394 aa
AA seq
DB search
MSKITLGNESLVGSLTPSNKKSYKLTNKIQEGKTPLYSVAFNFIDARYFTCFVSAGGNGI
NLYNCLEDGSISLLYAFADEDKEEEFNTASWACRVEGNPFVVAGGEKGIIRVIDVNNEKI
HKSLVGHGDLVNEIRTQPLKPQLVLSASKDESVRLWNVETGICILIFAGTGGHRNEVISV
DFHPSDKHRFVSCGMDTTVKIWSMKEFWTYVEKSFTWKDDPSKFPTKFVELPVFTASVHT
DFVDCNRWVGDFILSKSDEILLWEPILKENSPGEGTSDVLLRYPIPNCNLWFIKFSCDLS
LNYLSIGNEEGKIYVWDLKSCPPVLVTVLSHNQSKSVIRQTAMSTDGNTILAASEDGTIW
RWDAINKEQAVTVEAQPPPILHQYRRREGKSQLK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagataactttaggaaacgaatcacttgtcggctctttgactccatccaacaag
aaatcgtacaaactgaccaataagattcaagaagggaagacacctttgtactccgttgct
ttcaacttcatcgatgctcgttacttcacttgtttcgtctccgctggtggcaatgggatt
aatctgtacaattgtcttgaagatggaagcatatctttattgtacgccttcgctgatgaa
gataaggaggaggaatttaacactgcaagctgggcgtgtcgcgttgaagggaacccattt
gttgtggctggaggagagaaaggcataatccgagtcattgacgtaaacaatgaaaagatt
cataagagccttgtgggccacggggatttagtgaacgaaatcaggacacaacctctgaaa
cctcaacttgtgctttccgctagcaaggatgaatctgttcgattgtggaatgttgaaact
gggatttgtattctgatatttgctggaactggaggtcatcgaaacgaagttataagtgtg
gattttcatccctctgataagcaccgttttgttagttgtggtatggacaccacagttaag
atatggtcaatgaaagagttttggacatacgtcgagaagtcattcacatggaaggatgat
ccatcaaagttcccaacaaaatttgtagagctccctgtatttacagcttcggttcataca
gattttgttgattgtaaccgttgggttggtgactttattctttcaaagagtgatgagata
ctgctgtgggaaccaatactgaaagagaattctcctggagagggtacttcagatgttctt
cttagataccctattccaaattgtaatctctggtttatcaagttttcttgcgacctctct
ctcaattatctttcaatagggaatgaggaaggcaagatttatgtctgggatttaaagagt
tgccctcctgttttggttacagtgttatcgcacaatcagtcaaagtcggtgatcaggcaa
accgctatgtccactgatggaaacacaattcttgctgcctccgaggacgggactatatgg
cgttgggacgcgattaacaaggagcaagctgttacggtagaggcccagccacctcctatc
ttgcatcagtacaggaggagagagggaaagtcccaactaaagtaa
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