Brassica rapa (field mustard): 103869287
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Entry
103869287 CDS
T03449
Name
(RefSeq) polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM isoform X1
KO
K11462
polycomb protein EED
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103869287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103869287
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103869287
PRC2.2
103869287
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_IFT140_1st
PQQ_3
Motif
Other DBs
NCBI-GeneID:
103869287
NCBI-ProteinID:
XP_009145595
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Position
A05:19955177..19959181
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AA seq
398 aa
AA seq
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MRLGKLRQEQFPRDERFEMSKIALGNESLVGSLTPSNKKSYKLTNRIQEGKIPLYSVVFN
SIDARFFNCFVSAGGNGINLYNCLEDGGISSLHSYTDEDKEESFYTVSWACGVEGNPFVA
AGGVKGIIRVLNVNDKIIHKTLVGHGDSVNEIKTHHMKPQLVLSTSKDESVRLWNVETGI
CILIFAGTAGHRYEVVSVDFHPHDEHRFVSCGMDTTIKIWSMKEFWTYVDKSFTWKDDPS
KFPTKFVQFPVFTTSVHTNYVDCNRWFGDFILSKSVENEILLWEPQLIDNSPGEGTSDVL
LRYPIPNCNLWFIKFSCDLSLNYLSIGNQKGKIYVWDLKSCPPVLVTVLSHSLSKSVIRQ
TAMSTNGNTIIAASEDGTIWRWDAVTKVASESSQELMD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagactgggtaagcttcgacaagagcagtttccgagagacgagagatttgaaatgtcg
aagatagctttagggaacgaatcacttgtcgggtctttgactccatccaacaaaaaatct
tacaaactgaccaacaggattcaagaagggaagatacctttgtactctgttgtttttaac
tccatcgatgctcgtttcttcaattgtttcgtctccgctggtggcaatgggattaatttg
tacaattgtcttgaagatggtggcatttcttcattgcactcctacactgatgaagataag
gaggagtcattttacactgtaagctgggcgtgtggcgttgaagggaacccatttgttgcg
gctgggggagtgaaaggcataatccgagtccttaacgtcaatgataaaattattcataag
acccttgtgggccacggggattcagtgaatgaaattaagacacaccatatgaaacctcaa
cttgtgctttctactagcaaggatgaatctgttcgactgtggaatgttgaaactgggatt
tgtattctgatatttgctggaactgcaggtcatagatacgaagttgtaagcgtggacttt
catccccatgatgagcaccgttttgttagttgtggtatggacaccactattaagatatgg
tcaatgaaagagttttggacatatgtcgataagtcattcacatggaaggatgatccatca
aagttcccaacaaaatttgtacaattccctgtatttacaacttcagttcatacaaattat
gtagactgtaaccgttggtttggtgattttattctttcaaagagtgtggagaatgagata
ctgttgtgggaaccacaactgatagataattctcctggagagggtacttcagatgttcta
cttagataccctattccaaattgtaatctctggtttatcaagttttcttgcgacctctct
ctcaattatctttcgatagggaatcagaaaggcaagatttatgtctgggatttaaagagt
tgccctcctgttttggttacagtgttatcacacagtctatcaaagtctgtgatcaggcaa
accgctatgtccactaatggaaacacaattattgctgcctccgaggacggaactatatgg
cgttgggacgcggttaccaaagtagcatcagagtcttcacaggaactgatggattag
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