Brassica rapa (field mustard): 103869338
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Entry
103869338 CDS
T03449
Name
(RefSeq) EH domain-containing protein 1 isoform X2
KO
K12483
EH domain-containing protein 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103869338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103869338
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103869338
Membrane trafficking [BR:
brp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
103869338
Exosome [BR:
brp04147
]
Exosomal proteins
Proteins found in most exosomes
103869338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EHD_N
Dynamin_N
EH
MMR_HSR1
EF-hand_1
EF-hand_7
EF-hand_6
GTP_EFTU
EF-hand_5
EF-hand_8
TniB
TsaE
AAA_24
Motif
Other DBs
NCBI-GeneID:
103869338
NCBI-ProteinID:
XP_009145648
LinkDB
All DBs
Position
A05:20265403..20269082
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AA seq
545 aa
AA seq
DB search
MEIDSVAAGSCSKENQIIYKDWFEFADSDGDGRITGSDAIKFFSMSNLPRPELKQVWAIA
DAKRQGYLGFKEFIVAMQLVSLAQTGHEISHEVLHSDAVDFKNMNPPVMDGLIVLMAKKK
KHSPKSSDPNGSPAADASLTAHWFSSKSSKKISLSSVTSIIDGLKRLYIQKLKPLEVAYQ
FNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHMLKSSYPGAHIGPEPTTDRFVVVM
SGPDERSIPGNTVAVQADMPFSGLTSFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGE
KQRTQRAYEFTGVTSWFASKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKA
DQVDTQQLMRVYGALMWSLGKVLNTPEVARVYIGSFSDKPINEVSTGPIGRELFEMEQED
LLSDLKNIPKKACDRRINEFVKRARAAKIHAYIISHLKKEMPAIMGKAKAQQKLLDNLED
VFGKVQREHHLPKGDFPNVDQFREVLSGYNFDNFEKLKPKMLQTVDDMLGYDIPELLKNF
KNPYD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgattccgtcgcagctggctcttgctccaaggagaatcaaattatctacaag
gactggttcgaattcgcagattcagacggagatggacgcattactggtagcgatgcgatc
aagttcttctccatgtccaatctgcctcgacctgagttgaagcaggtctgggcgattgca
gatgcaaagagacaaggctatcttggattcaaagagtttatcgttgctatgcagcttgtt
tctttggctcaaactggtcatgagatatcgcatgaagttcttcatagtgacgcagttgat
ttcaaaaatatgaatcctcctgttatggatggtctcatcgtattaatggcgaagaagaag
aaacattcaccaaagtcgagtgatccgaatggtagtcctgctgcagatgcatcacttaca
gctcattggttctcttccaaatcttcaaaaaagatttctctgtcctccgtaacatctata
atcgatggcctgaagaggttgtacattcagaagctgaagccacttgaagttgcttatcag
tttaacgattttgtatctcctttgttgacgaacagtgatttcgacgccaaacctatggta
atgcttctgggtcagtactccacagggaaaacaactttcattaagcatatgcttaaatct
agttatccaggagctcatattggaccagaaccaactactgacagatttgttgtcgtcatg
tctggacctgatgaaagaagtatcccggggaacacagtagcggttcaagcagatatgcca
ttcagtggtcttacaagttttgggactgcctttttgtcgaagtttgaatgttctcagatg
cctcaccctctgctggagcacataacatttgtcgatactcctggagttttatcaggggag
aagcaacggactcaacgagcatatgaattcacaggtgttacatcatggtttgcctcgaag
tgcgatctcatcctcctcctgttcgatccacacaagctggatgtaagcgatgagttcaag
cgggttatttcatctttacgtggtcatgatgacaagatccgcgttgttctgaataaggct
gaccaagtggacactcagcagctaatgagggtgtatggagctctcatgtggtcacttgga
aaagttctcaatactcctgaggttgcccgtgtctacattggatcgttcagtgataaaccc
attaacgaagtttcaactggtccaattgggagagaattgtttgaaatggagcaagaagat
cttctctctgatctgaaaaacattccaaagaaagcttgtgatcggcgaataaatgagttt
gtgaaacgggcaagagctgcaaagatacatgcgtacatcatcagccatttgaagaaagag
atgccagccataatgggaaaagccaaagctcaacaaaaactgttggataacttggaagac
gtctttggaaaggtacaaagagagcatcatttaccaaaaggagatttcccaaacgtggac
cagtttagggaggtgctaagtggttacaacttcgacaattttgagaagctaaagccaaaa
atgttgcagactgttgatgatatgttggggtatgacattccggagctcttgaaaaatttc
aaaaacccttatgattaa
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