KEGG   Brassica rapa (field mustard): 103869430
Entry
103869430         CDS       T03449                                 
Name
(RefSeq) pre-mRNA-processing protein 40B
  KO
K12821  pre-mRNA-processing factor 40
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103869430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:brp03041]
    103869430
Spliceosome [BR:brp03041]
 Complex A
  U1 snRNP components
   U1 related factors
    103869430
 Complex B
    103869430
SSDB
Motif
Pfam: FF WW WW_TCERG1 FF_RHG35_4th WW_2 Inhibitor_I66
Other DBs
NCBI-GeneID: 103869430
NCBI-ProteinID: XP_009145759
LinkDB
Position
A05:20703441..20712017
AA seq 993 aa
MANNPHYPGIQPFQHPNASSVDLPRGFAPSMNFQHRPPIQAPQSEQVAHLASQNFQYVGR
GATMNNGFPPQSYTPQLLQSMHHSVERPSQSNQGQHVPLGHPSLISQPNVPVASGTFLPE
PYLRTSDINMNGGPRALFSHQSATPFGHLRAPTQVTGPSSHSQAQQSAPISQANAPSSIM
NPTFEHPKVASSQPIPSQEAATDWVEHTSADGRRYFFNKKTKQSTWEKPVELMTLFERAD
AKTDWKEHSSPDGRKYYYNKVTKQSTWTMPEEMKIAREQAENASVQGLHAEGVVDASKVL
SRSETASTAAPTGLPNQTSSTPPTSDTSEKLALTSDREQAASVPGSSSPVENVDQVQAIA
DKTPELCDTAKTDNPSATVMITSAATLVDKETVSTENSGDADDVSAKNTNQGSGTGPKES
QKHVVDSERVDSQSEGKQIHQENISYTNKSEAVDVFKSLLKSANVGSDWTWEQAMREIIN
DRRYGVLRTLGERKQAFNEFLAQMRKAAEEEKIARQLKRYEDFRRMLEESVELTPSTRWS
KAVTMLEDDERFKVVEREKDRRNIFEDHISDLKEKERVKAFGDRKRNIVEYRRFLESCNF
IKPNSQWRKVQDRLEVDERCSRLEKIDQLEIFQEYLRDLEREEEERKKIQKEELKKAERK
HRDEFRGLIDEHIATGELTAKSSWRDYLVKVKDLPVYLAIASNSSGATPKELFEDAAEDL
KRKYHELKSQIKDVLKLRKVTLSTESTFDEFKVSVSEGISSPSIPDFKLKLVFDDLLERA
KEKEEKEARKQTRNTEKLVDMLRSFKYITASSSWEDYKHLVEGTEKFRTIGDESFRKKTF
EDYISHLKEQAKRIKQNKKEHVREEHDREKDKYGREKERVRERDNRDHRKQGSADNYNHD
VDELHGKERRRSGRDSHSRHRERHTSVKENEADHYKESHKAGRGHKESRQQRGLVREAED
EGREKRRRKEGDSEQTKRAEKEEELEDGECGRY
NT seq 2982 nt   +upstreamnt  +downstreamnt
atggctaataatccccactatcctggcattcagccattccagcatccgaatgccagttcc
gtagatttaccccgaggctttgctccatccatgaattttcagcatcgtcctcccattcaa
gctccgcagtccgagcaagttgctcatttggcttctcaaaattttcaatatgttgggcga
ggcgcaacgatgaacaatggatttccacctcagtcttatacgcctcagttactacaatca
atgcaccattcggttgaaagacctagccaatcaaatcaggggcaacatgtgccactagga
catccgtctctaatttcacagccaaatgtgccagttgcctctggtaccttcttgccggag
ccttacctacgaacttcagatattaatatgaatggtggccctagggcactcttttctcat
cagagtgccacacctttcggacatctgagggcaccaactcaagtcactggaccaagcagt
catagtcaggcacaacaaagtgcacctatcagccaggctaatgcaccatcttctataatg
aatccaacatttgaacatccaaaggtagcttcttctcaacctataccttctcaagaggct
gcaacagattgggttgagcatacctcggcagatggacggagatattttttcaacaagaag
acgaagcagtccacttgggagaagcctgttgagttgatgactctatttgagagagcagat
gctaaaactgactggaaagaacattcaagtcctgatggaagaaagtattattataataag
gttaccaagcaatcaacatggacaatgcctgaggagatgaagattgctcgtgaacaagca
gaaaatgcatctgttcaagggctgcatgcagaaggcgttgttgatgcttctaaggtgctg
tctcgttctgaaacagcatcgactgcagctcccactggtttaccaaaccaaacatcatct
acgcctccaacatctgataccagtgagaaactagctcttacttctgatcgggagcaggca
gcttcagttcctggaagctcttccccggtcgaaaatgttgatcaagttcaggcaattgca
gataaaacaccagaattgtgtgatactgcaaaaactgataatccttctgccactgtgatg
ataacttctgctgctacattggttgacaaggaaacagtatcaaccgagaacagtggagat
gcagatgacgtgtcagctaaaaacacaaatcaaggtagtgggactggaccaaaagaaagc
caaaaacatgtggtggatagtgaaagagttgacagtcagtcggaaggcaaacagattcat
caagagaatatttcttatacgaacaaatcggaagctgtggatgtcttcaaatcacttttg
aaatctgccaatgttggatctgactggacatgggagcaggccatgagagaaataattaat
gatagaagatacggggttctgaggactcttggagagcggaagcaagccttcaatgagttt
ctagctcaaatgagaaaagcagcagaggaggaaaagatagccagacagctaaaacgatat
gaagattttagaaggatgttagaggaaagcgtggagcttactccttctactcggtggagc
aaggctgtgactatgttggaagacgatgagcgtttcaaagttgttgaacgagaaaaagac
cgtcgtaatatttttgaagatcatatcagtgacttaaaggagaaggagcgggtgaaagct
tttggggatcgcaagcggaacattgttgaatacaggagatttttggaatcttgcaatttc
attaagcctaatagccaatggcgcaaagttcaggaccgtttagaagtggatgaaagatgt
tcacgtcttgagaaaattgatcagctagaaatatttcaggagtatctgcgcgatctggag
agagaagaagaagagagaaagaagatacaaaaggaagaactaaaaaaagcagagcgaaaa
catcgtgatgagttccgtggtctgatagatgaacatattgctacaggagagcttactgcc
aaaagtagttggcgtgattatttagtgaaggtcaaagatttaccagtatatttagcaatt
gcatcgaactcctctggcgctacaccaaaagagttatttgaagatgctgctgaggatttg
aaaagaaagtaccacgagctcaaatctcagataaaggacgtattgaagctgagaaaggta
acgttatccactgaatcaacgtttgatgagttcaaagtctcagtttctgagggtatcagt
tccccatctattcctgactttaaactgaagttagtgtttgatgatttgctggaaagagca
aaggagaaggaagagaaggaagccagaaaacagactcggaatactgaaaaattggtggat
atgcttcgctccttcaagtatataactgcctcttcatcctgggaggattataagcatctt
gttgaaggtactgaaaaattccgtaccataggggacgagagcttccggaagaagacgttc
gaggattacatatcgcacctgaaagaacaggcaaaaaggatcaaacagaacaagaaggaa
catgttagagaggaacatgacagggagaaggataaatacggaagagagaaggagagagtg
agagaaagagacaatagagatcatcgtaagcaaggttcagctgataattacaaccatgac
gtggacgaactccatggaaaagaacgtagaagatccggaagagatagccatagtagacat
cgagaaagacatactagtgtgaaggaaaatgaggcagatcattacaaagaatctcataaa
gctggtcgtggccataaggaatcaagacaacagcgaggtttggttcgggaagccgaggat
gaaggcagggaaaagcggcgtagaaaagaaggagatagtgagcaaacaaagcgtgcggaa
aaggaagaagaacttgaagatggagaatgtggtaggtactaa

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