Brassica rapa (field mustard): 103869528
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Entry
103869528 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103869528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103869528
03029 Mitochondrial biogenesis [BR:
brp03029
]
103869528
Membrane trafficking [BR:
brp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103869528
Atg1 complex
103869528
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103869528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103869528
NCBI-ProteinID:
XP_033148592
LinkDB
All DBs
Position
A05:21284484..21287612
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AA seq
634 aa
AA seq
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MALPDAVEDKFFSASGHRKVKKFYNAMEDEVRTVFSKMNRSSNSEGAKAEQIIFEFFAKT
LHIILESRTPFMSSRNFSSSSEQIMNSPSSSSSSSSSVRPRDKWFNLALRECPAALESFD
IGRRSTLEPLVVDVVLVARPFDQMNSPGGRELIRNFSGKEYHSDQDDCEGKNEQIIERWV
VQYDNRKVRERRSSSNNNNNKLQVMYKKATLLLRSLFVMVRLLPAYKIFRELNSSGQIFK
FELVPKVPTIIEPFTRREEGEMHKFAFTPVDTICGRLCMSVLYRSLSESDVSCSQHSAPL
SPTFITDYVGSPLADPLKSFPSLPLSYGSPPLMSFERRHSWSFDRCKASSPPPSVSCSPS
PTRSDPQAIVXYPCSRRLPPHPCDITTGRRKESYXECLQDFSPPCSPSAPTQAFPRSITR
TESAPVRIPPPSFESKQNVVVPPSSHLKLSRHASLKPVRNTGPVESGVRLSTNSSPRISF
SRSSSRSYQDDFDDTDFPCPFDVEYDENTDPSSSRPGSLDQRGDIHEPPPFESSGSYPKK
SQDAGVGALVNMLKKAPPLRQDVSETSTPELCWNNNKNKPGGDQEIATASMTASGIALAA
KTTADALEELRSYKEMKNVLLSQSTKDSSSPFAV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcctgatgcggttgaggataagttcttttcagcttcaggccatcggaaagtt
aagaagttttacaacgccatggaggatgaagtgagaacagtgttctcaaagatgaacagg
agtagcaactccgaaggtgctaaagcagagcagatcatattcgagttcttcgccaaaacc
ctccacatcatcctcgaatcaaggactcctttcatgtcttcaagaaacttcagtagtagc
agcgagcagataatgaactcaccttcctcatcttcttcgtcttcctccagcgtcaggcct
cgtgacaaatggttcaacctagctctcagggagtgtcctgcagcgttagagagcttcgac
atcggccgcagaagcacgttagagcctctggttgtcgatgtggttcttgtggcgagacca
tttgatcagatgaattctccaggtgggagagagcttatcaggaacttctccgggaaagag
tatcactctgatcaagatgattgtgagggcaagaacgagcagatcattgagagatgggtt
gtgcagtatgataataggaaggttagagaaaggaggtcaagtagtaataataataataat
aagttgcaagtgatgtataagaaagcaactttgttactgagatcactctttgtaatggtt
aggcttttacctgcttacaagatcttcagagaactcaactcatctggacaaatcttcaag
ttcgagcttgtccctaaggttccaaccataattgagccatttactcgtagagaagaggga
gagatgcacaagttcgctttcacgccggttgataccatctgcggtaggctttgcatgtcg
gtgttgtatcgatctctctcggagtcggatgtcagttgcagccaacactcagctcctttg
tctccgacctttattactgattacgttggaagtcctttagctgatcctttgaaaagtttc
ccttctctgcctctttcttatggctcgccgccgttgatgtcgtttgagaggcgtcatagc
tggagttttgatcgttgcaaggcctcttctccacctccttcggtttcttgctcaccgtcg
cctacacggtctgatccacaagcaattgtancttatccttgttctcgtcgccttcctcct
catccttgtgatataactactggtcgtaggaaggaaagctatnnggagtgtttgcaagat
ttttctcctccttgttctccttcagcacctacccaagccttcccaagaagcatcacgcgt
actgaaagtgctccagttaggattccacctcctagttttgagtccaaacagaacgtggtg
gtgccaccttcttctcatttgaaactgtcgagacacgcttctttgaagcctgtgagaaac
actggtcctgttgaatctggggtgaggctatctaccaacagctcaccgaggatatcattt
tctagaagttcaagtagatcataccaagatgattttgatgatactgattttccttgtcca
tttgatgttgagtatgacgaaaatacagatcctagtagtagcagaccaggctccttggac
cagagaggagatatacatgaaccaccaccatttgagtcgagcggttcatacccaaagaag
tcacaagatgcaggagtcggtgctctagtgaatatgctgaagaaagctccacctctcaga
caagacgtctctgaaacttccacacctgaactttgttggaacaacaacaagaacaaacct
ggaggggatcaggagatagcaacggcgtctatgacagcgtcagggatagctctggcggca
aagacaacagccgatgccttggaagagctgaggtcttacaaagaaatgaagaatgtgttg
cttagccaatccacaaaggactcgtcctcaccctttgctgtttga
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