Brassica rapa (field mustard): 103869541
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Entry
103869541 CDS
T03449
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103869541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103869541
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
103869541
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103869541
Prokaryotic type
103869541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
103869541
NCBI-ProteinID:
XP_033148803
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All DBs
Position
A05:21360841..21362647
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AA seq
322 aa
AA seq
DB search
MASSTPKTLMDYFQPPKRHKASSFPAVSASGGSHGLDSAAKSPPRVTVADDSAGLTPEQI
TRSELNKSVAKSKRNLALCSEKVTKAKAEGSCYVPLTELLVEESWLKALPGELDKPYAKT
LSCFLEREIIIDGQAPPIYPPQHLVFNALNTTPFDRVKAVIIGQDPYHGPGQAMGLSFSV
PEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWALQGVLLLNAVLTVRSKQPNSHAKKG
WEQFTDAVIRSISQQKQGVVFLLWGKYAQEKSKLIDGSKHHILTAAHPSGLSAHRGFFNC
RHFSRANQLLEQMGTPPIDWQL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcgacacctaaaaccctaatggattattttcaacctcccaaacgccacaaa
gcttcttcctttcccgccgtttccgcctccggtgggtcccacggtctggactctgcagca
aaatcgccgcctcgcgtaaccgtcgccgacgactcggccggccttacaccagagcaaatc
actcgctctgagctcaacaaatccgtagccaaatccaaacgcaacctcgccctctgctcc
gagaaggtcacaaaagcgaaagctgaaggaagctgctacgtgccattgactgagctctta
gttgaagaatcatggcttaaagctctccctggtgaattggacaagccctacgccaagacc
ctttcttgtttccttgaacgtgagatcatcattgacggtcaagcccctcctatttacccg
ccgcagcatttggttttcaatgctctaaatacaactccttttgatcgagtcaaggctgtc
attatcggacaggatccttaccatggacctggtcaagctatgggtttgtctttctctgtg
cctgaaggggagaagcttccgtctagtcttttgaacatatttaaggagcttcataaagat
gttggctgttctatccctcgtcatggtaatctacagaaatgggctctgcagggtgttttg
ctgttgaatgctgttcttacagtaaggagtaaacagccgaattcacatgcaaaaaaagga
tgggaacaattcactgatgctgtcattcgaagtatctcgcagcagaagcaaggtgttgtc
tttctcctctggggaaaatacgctcaagagaaatccaagttgatagatgggagtaaacat
cacattctcacagcagctcatccatctggtttgtcagcgcatagaggcttcttcaattgc
aggcatttctctcgagcgaaccagctacttgagcaaatgggcactccccctatagactgg
caactctaa
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integrated database retrieval system
