Brassica rapa (field mustard): 103869709
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Entry
103869709 CDS
T03449
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103869709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103869709
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103869709
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
HECT type E3
103869709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
103869709
NCBI-ProteinID:
XP_009146032
UniProt:
A0A3P5ZJR6
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All DBs
Position
A05:complement(22242120..22249268)
Genome browser
AA seq
1033 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSTKERDAPKLLEQTRMERNRRLLQKQQNAAALKIQKFFRGRR
SVAIERSKVRREFCETYGNNCQNVDRNCFEPGSSFLRQLLFFFKAQNSGDFVILVETCRL
LKIFTHSNGDILSLFSGLDYSAEHNLVDFRVKKLAFTCIDAIHHNSRDRLRDQLLVTTEE
ASTSTAILMEAMSLVLDPKLPWVCKTVSYLQKRHIFQLVRDIVITAKESPRGQTMIGSIL
SLERVLILVVTHVGREPCCCPVVDPRWSFSSMILTIPLIWQLFPNLKVVFANPNLSQHYI
HQMAFCIQKDTHVLPTDTSAEFPGYACLLGNTLETANVVLSQPDCSLDMAVDIASVATFL
LERLPPVKSSERESKQSSSEEDDMLIDDIPEFVLNKTLEQQITTNAIDSRFLLQLTNVLF
HQVSLGTQPYDEEKEARAIGTASSFLYAAFNTLPLERIMTVLAYRTELVIVLWNYMKRCH
ENQKWSSMPNLLAYLPGDAPGWLLPLVVFCPVYKHMLMIVDNEEFYEREKPLSLQDIRLL
IIILKQALWQLLWVNPLTQPSTGKSVSNNLSKKNPVGLIQNRAGVVVAELLSQLQDWNNR
QQFTSSSDFQADTVNEYFISQAIAEGTRANYILMHAPFLIPFTSRVKIFTTQLATARESH
DHGSQAIFARNRFRIRRDHILEDAYNQMSALSEDDLRGSIRVTFVNELGVEEAGIDGGGI
FKDFMEKITRAAFDVQYGLFKETVDHMLYPNPGSGMVHDQHLQFFHFLGTLLAKAMFEGI
LVDIPFATFFLSKLKHKYNYLNDLPSLDPELYKHLIFLKRYKGNIAELELYFVILNNEYG
ERTEEELLPGGKDMRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPKECIDMF
NEHELQVLISGSADSLDIDDLRQNTNYTGGYNAGHYVIDMFWEVLKSFSTENQKKFLKFV
TGCSRGPLLGFKYLEPAFCIQRAAGSASNEAVDRLPTSATCMNLLKLPPYQSKEQLETKL
MYAISAEAGFDLS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggcgatccgtcgactcggaagcgagttgatttaggtggtcggagcact
aaggagagagatgctccgaagcttctggagcagacgaggatggagcggaatcgccgtctg
cttcagaagcaacagaatgccgctgccctcaaaattcagaaattctttagaggtagaaga
tcagtggccattgagcgctccaaggtgaggcgtgagttctgtgaaacctatgggaataat
tgccagaatgttgacaggaattgctttgagccaggttcaagtttcctccgtcagttactg
tttttcttcaaggcacaaaactcgggagattttgtgatacttgtggagacgtgtcgccta
ctgaaaatttttactcacagcaatggtgacattctcagccttttctctggcttggactat
tccgctgagcataacttggtggattttagagtaaagaaacttgcttttacctgcatcgat
gctatacatcataatagcagggaccgtttaagggatcagctgttagttactactgaagaa
gctagcacctcaacagctatcttgatggaggcgatgtcattggtgctagatcctaagctg
ccttgggtttgcaaaactgtgagttatctacagaaaagacacatattccaactagtcaga
gatatcgtcattacagctaaggaaagccctagaggccagactatgatcggtagcattctt
tcactagaaagagtattaatcctggtagtaactcatgttggccgtgagccatgttgctgc
cctgttgttgatccacgttggagtttctcatctatgatccttacaatacccttgatatgg
cagctcttcccaaacctgaaagtggtctttgccaacccgaatctaagtcaacactacatt
caccagatggctttctgtattcaaaaagatacccatgtcctcccaacagatacaagcgca
gagtttccaggttatgcttgtcttcttggtaatacgttggaaactgcaaatgtggtgttg
tcacagcctgactgttcattggatatggcagttgacattgcatcagttgcaactttcttg
ttagagagacttcctcctgtgaagtcatcagaaagagaaagcaaacagagctcttctgag
gaggatgatatgttgattgacgatataccagaattcgtcttgaataagactctggagcag
cagataaccaccaatgctatagactcacgttttcttctgcagttaacaaatgttttgttc
catcaagtttcgcttggtacgcagccatatgatgaagaaaaagaagcacgagctattggc
acagccagttcttttctgtatgcagcattcaacaccctccctcttgagagaatcatgaca
gttttagcttatagaaccgagcttgtaattgtgttgtggaattatatgaaacgatgccat
gagaaccagaagtggtcatccatgcctaatctcctagcttaccttccaggagatgctccg
ggttggctattacctctggttgttttttgtcctgtttataagcatatgcttatgatagtc
gacaatgaggagttttacgagcgagagaagccactgtcgctacaagatatcagattgctt
atcatcattctcaagcaagctttatggcagttactatgggtgaatccacttacgcagcct
agcacggggaaatctgtctccaacaacctctcaaagaagaaccctgttggcttgattcag
aacagggctggggttgtagttgctgaattactttcacagttacaagattggaacaaccgg
caacaattcacttcctcgagcgatttccaagctgatacagtcaatgaatattttatctct
caggcaatagcggaaggtacaagagccaactacatactgatgcacgctcctttcctgatt
ccgtttacaagcagagtcaagatattcacaacacaattagcaacggcgagggagagtcat
gatcatggatctcaagccatttttgctcgaaatcggttcagaatacgaagagatcacatc
ttggaagatgcttacaatcaaatgagtgcattgtcagaagatgatctccggggatcgatc
cgcgtgacatttgtcaatgaacttggagttgaggaagctggtattgatggtggtggcatt
tttaaagacttcatggagaaaattacccgagcagcctttgatgtgcaatatgggttgttt
aaggagaccgttgatcacatgctttatcctaatcctggatcaggaatggtacatgaccag
catctccagttctttcattttctcggcactcttctcgcaaaagctatgtttgaagggatt
ctagttgatataccatttgcaacttttttcctcagcaaattaaaacacaagtacaactat
ttgaacgatttgccttctctggatcctgagttgtataagcatcttatatttctgaagcgt
tataagggtaatatcgcagagttggagctttactttgttattctcaacaacgaatatgga
gagaggacagaggaagagttacttccagggggtaaagacatgcgggttacaaatgagaat
gttataactttcattcatctggtttcaaatcatcggttgaattttcagatacgccaacag
agttctcatttcttgagagggtttcagcaactcattccaaaagaatgtatcgacatgttc
aatgaacatgagcttcaggttcttatatctggttcagctgatagtttggatattgacgac
ttgcgtcagaacactaactatacaggaggctacaacgctggacattatgtgattgatatg
ttctgggaagttctgaaaagcttctcaaccgaaaaccagaagaagttcttaaaatttgtg
acaggctgttcgagaggaccactgcttggtttcaaatacttggaacctgcattctgtata
cagagggctgcgggtagcgcgagtaatgaagcagttgatagactacctacatcagccact
tgtatgaaccttctcaagcttcctccctatcaaagcaaagagcaacttgagaccaaattg
atgtacgccataagcgcagaagcaggttttgacctgagctga
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