Brassica rapa (field mustard): 103869811
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Entry
103869811 CDS
T03449
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103869811
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103869811
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103869811
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GFIT
Motif
Pfam:
Ion_trans
DUF6525
TARP
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103869811
NCBI-ProteinID:
XP_033147256
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Position
A05:complement(22009583..22023624)
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AA seq
692 aa
AA seq
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MEKDDVPMLPVSDSSSLSRTRPFTSRSRSVSLANTSSILDGFDSSTVVLGYTGPLRTHRR
PPLVQMSGPLSSTRSSEPLFLPPPPTSTRDVSSSQPERYPSFAALEHKNSEEEFVLKHAH
LLRSGQLGMCNDPYCTTCPSYYNRKASQIPTSRVSAIFDSTFHDAKGWARRFATSINRHL
PGIMNPHSKFVQRWTKFFAFSCLLAIFIDPLFFFLILVKQNNNCIEIDWPMAHTFVAVRS
VTDVLFSVNILLQFRLAYVAPESTVVGAGQLVDHPRKVASHYFRGKFLLDLFIVMPLPQI
LILWIIPANLAISGANYAKNLLRAAVLFQYIPKLYRLLPLLAGQTPTGFIFESAWANFFI
NLLTFMLAGHVVGSCWYLFGLQRVNQCLRDACGSSDRPCRELIDCRGETSALSAAWKDNA
SARACFQEDGFPYGIYLKAVNLTNHNSLFTRYSYSLFWGFQQISTLAGNLIPSYFLGEVF
FTMGIIGLGLLLFALLIGNMQNFLQSLGRRNLEMTLRRRDVEQWMRHRRLPGDIRKRVRE
AERFNWAATRGVNEELLFKNMPDDLQRDIRKHLFIFLKKVRIFSVMDEPILDAIRERLKQ
RTYIRSSMVLHRGGLVEKMVFIVRGEIESVGEDGYVLPLSEGDVCGEELLTWCLERSSVN
PGTFFVDSMCSLTDRHKTMSHSTLSKACSTIT
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatgatgttcccatgcttccagtttcagactcatcatcgttatctcgtact
aggcctttcacttccaggtcacgtagcgtttccctcgcaaacacttcttcgatccttgat
gggttcgacagctcgactgttgttttaggctacacaggtcctcttcgaactcatagaagg
cctcctttagttcagatgagtggtcctctctcatctactcgcagttctgagcctctcttt
cttcctcctcctcctacttccactcgtgatgtctcctcctctcagcctgagaggtaccct
tcctttgctgctctcgaacacaaaaactcagaggaggagttcgtattgaaacacgcacat
ctcttgagatctggacagttgggtatgtgtaatgatccttactgtaccacttgtccttct
tactacaaccggaaagcttcccaaatccctacttctagagtttctgccatttttgattcc
actttccatgatgctaaaggttgggctaggaggtttgctacatctattaatagacactta
ccaggaatcatgaatcctcactccaagttcgttcagagatggactaagttctttgccttt
tcttgcttgttagctatttttatagatcccctcttcttcttcctcatattagtcaagcag
aacaataattgcattgagattgattggccgatggctcacacatttgtagctgttagaagt
gtaacagatgttttgttctctgtaaacatcctgcttcagttccgattagcctatgtagct
cctgagtctacggttgttggtgctggccagttggtagaccatccaagaaaagttgctagt
cattacttccgaggaaagtttttactagatttgttcatagtgatgccacttccacagata
ttgatattatggataataccagcaaacttagccatatctggggcaaactatgcaaagaac
cttttacgtgctgcagttcttttccaatacattcccaagttatataggctactaccactt
cttgctggacaaacaccgactggcttcatctttgagtcggcttgggctaatttttttatt
aatcttcttaccttcatgcttgctggtcatgtcgttggctcttgttggtatctttttggt
ctgcagagagttaatcaatgccttcgagatgcttgcggtagttctgatcgtccatgcaga
gagcttatagattgtcgtggtgaaactagcgctttatcagctgcgtggaaagataatgcg
agtgcccgtgcttgttttcaagaggatggttttccttatggaatctatttgaaggcagtt
aatctcaccaatcataatagcctcttcacaagatacagttactctcttttttgggggttt
cagcaaatcagcacgcttgctggaaacctaattccaagttactttcttggggaggtcttc
ttcaccatgggcattatcggattggggcttttgcttttcgctcttcttattggtaatatg
cagaacttccttcaatctctcggtcgaaggaatttggaaatgactttgagacggcgtgat
gtggagcaatggatgaggcatagacggttgccaggagatattagaaagagggtgcgagag
gctgagcggttcaactgggctgctaccagaggagttaatgaagaattgttgtttaagaat
atgcctgatgaccttcaaagagatataagaaaacacctcttcatatttctcaagaaggtg
aggatattttcggtgatggatgaaccaatcttagatgctatacgtgagaggctgaaacaa
aggacttacataaggagtagcatggtcttgcaccgcggaggtctagttgagaaaatggta
ttcatagtgagaggtgagatagagagcgttggagaagatggttatgttctaccattgtca
gaaggagatgtttgtggtgaagaacttctcacttggtgcctcgaacgctcttctgtaaac
cccggtacattctttgttgactctatgtgctcattaacagacagacataaaaccatgtct
cattccactttgtcaaaagcatgctcaacaataacctga
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