KEGG   Brassica rapa (field mustard): 103869977
Entry
103869977         CDS       T03449                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103869977
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:brp01009]
    103869977
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brp03400]
    103869977
Enzymes [BR:brp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     103869977
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     103869977
Protein phosphatases and associated proteins [BR:brp01009]
 HAD phosphatases
  Other HAD phosphatases
   103869977
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     103869977
SSDB
Motif
Pfam: zf-PARP PNK3P Hydrolase_6
Other DBs
NCBI-GeneID: 103869977
NCBI-ProteinID: XP_009146310
LinkDB
Position
A05:complement(23391582..23396292)
AA seq 701 aa
MQVLILQVNYNSTVFFHFRMAGKCELSPNFLEISPNGHMVLTSFVFHHSHSSSLSIIHSS
NLFFPRTRRKVSLPSKKMPIVAEYAKSNRSSCKACSKAIASKTLRVGMISKGPGGFDMTR
WHHLECFPTDSVAIDSVDDVKGLSALEKDDQDALAKLVEQCGERAKEQVDEKEEEIKDPG
SDEISGEKVKEAKGSSASASVIAEYAKSSRSSCKKCSQTIAARELRLGMVTRDSRGFDMT
KWHHLGCFPVESVAVDSVEEIGGFSSLQSDDQDALKEFVLQCGKKTSVDKMEEVNDESVA
DKGQAEETNKRKHSQVEEEVEIKKAGSDEKSGQKVKETKGSSASSKVIAEYAKSSRSSCK
KCSQPIAAKELRLGMVTRDSRGFDMTKWHHLGCFPVESVAVDSVEHIGGFSSLQNGDQDA
LKELVQQCVNKTLKMDEDNDETGTDHHQTEETNKRKHSQVGEVLVEDEVQTNANQPSTRK
PKMNTSESTSQVVAEAEISFSASDVKEKYRDASLLPKWKAFETVIFLERDDGLNDSEKIA
AFDFDGCLANTSVKKVGADAWSLMYPSIPEKLQSLYSQGYKLVIFTNESNIDRWKNKRQA
AVDSKIGRLNSFIKRVEVPIQVFIACGVASSGGKDDLYRKPKPGMWQLMKKHFNSGIEID
MDKSFYVGDAAGRKGDHSDADIKFAQANGLKFFTPEEYFIA
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgcaagtccttatactccaggtcaattacaattccacagtcttcttccacttcagaatg
gcgggaaaatgtgaactgagccctaattttctcgaaatctcccccaatggccatatggtt
ttaacttccttcgtctttcatcactctcactcttcctctctttcgattatccactcttcc
aatctcttttttccgagaacgaggaggaaagtgtctctaccatcaaagaagatgccgatc
gtagcggagtacgcgaagtcgaaccggtcttcgtgcaaggcgtgttcgaaggcgatcgcg
tcgaaaaccttaagggtggggatgattagcaagggacctggcggattcgacatgaccagg
tggcaccatctggagtgtttccctaccgattcggtggcgattgattccgttgatgatgtc
aaaggcttatccgctttagagaaagatgatcaggatgctttggcgaaactggtggaacag
tgtggtgagcgtgctaaagaacaggtcgatgagaaggaagaagagattaaagatcctgga
tcagatgaaataagtggggagaaggttaaggaggcgaaaggttcttctgcttctgcgagc
gttattgctgagtatgctaaatcaagcagatcgtcatgcaagaagtgctctcagacgatt
gctgctagagaactgaggttggggatggtgactagagactcccggggatttgatatgact
aaatggcatcacttgggatgtttccctgttgaatcagttgcagttgattctgtagaggag
attggtggattttcatcactgcagagcgatgaccaggatgcactaaaggagtttgtgcta
caatgcgggaagaagacctcggtagataagatggaagaagttaacgatgaatctgtagct
gataaagggcaagcggaggagacaaacaaaagaaaacattctcaggttgaggaagaggta
gagattaaaaaggccggatcagatgaaaaaagtgggcagaaagttaaggagacgaaaggt
tcctctgcatcttcaaaagttattgctgagtacgccaaatcaagcagatcatcatgcaag
aagtgctctcagccgattgctgctaaagaactgagattagggatggtgaccagagactct
cggggatttgatatgactaaatggcatcacttgggatgtttccccgttgaatcagttgca
gttgattccgtagagcacattggtggattttcatcgctgcagaatggagatcaagatgca
ttaaaggaactggtccaacaatgcgtgaacaagaccttgaagatggacgaagataatgat
gagactggaactgatcaccaccaaacggaggagacaaacaaaagaaaacactctcaggtt
ggggaggtattggttgaagatgaagtacaaacaaatgcgaaccaaccgagtactagaaaa
cctaagatgaacaccagtgagtcaacttctcaggtcgtagctgaagcagaaatatccttt
tcagcttctgatgtgaaggaaaagtacagggatgccagtctattaccgaagtggaaagcg
tttgagactgtaatattccttgagcgggatgatggtcttaatgattcagagaagatagct
gcatttgattttgatggatgccttgcaaacacatctgtgaaaaaagtaggtgcagatgca
tggtcacttatgtatccttctattcctgagaaactgcaaagtctttatagtcaaggctat
aagctggtgattttcacaaatgagtccaacattgaccggtggaaaaacaaaagacaagct
gctgttgactcgaaaattggacgcctcaacagttttatcaaacgcgtggaggtccccatt
caggtgtttatagcctgtggagtcgcaagttctggtggtaaagatgacctttaccgcaaa
cccaagcctggaatgtggcaactcatgaagaagcactttaactctggaattgaaattgat
atggataaatcgttctatgttggggatgcagccggaagaaaaggcgatcacagcgacgca
gacattaaatttgcgcaggcgaatggattgaagttttttactccggaggagtactttatc
gcttga

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