Brassica rapa (field mustard): 103869992
Help
Entry
103869992 CDS
T03449
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00541
Biosynthesis of various nucleotide sugars
brp01100
Metabolic pathways
brp01250
Biosynthesis of nucleotide sugars
Module
brp_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
103869992
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
103869992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
DUF3269
Motif
Other DBs
NCBI-GeneID:
103869992
NCBI-ProteinID:
XP_009146324
UniProt:
M4EEU8
LinkDB
All DBs
Position
A05:complement(23478833..23481694)
Genome browser
AA seq
665 aa
AA seq
DB search
MATYKPKNILITGAAGFIASHVANRLVRTYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK
FVKGDIASADLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH
KGEVNHVYNIGTTKERRVIDVANDISKLFGINPDSTIQFVENRPFNDQRYFLDDQKLKKL
GWAERTTWEEGLKKTMEWYTANPEWWGDVSGALLPHPRMLMMPGDRLCDSGDEHKDADGN
QTFTVVTPPKTGGSGDNKTSLKFLIYGKTGWLGGLLGKLCEKQGIAYEYGKGRLEDRASL
VADIRRVKPTHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENGLLMMNFA
TGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISS
DLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEI
LEMYKSYIEPGFKWSNFTLEEQAKVIVAPRSNNEMDGAKLSKEFPELLSIKDSLIKYVFE
PNKRT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctacatataagcccaagaacatcctcatcaccggagcggcgggattcatcgcctcc
cacgtggcaaacaggctagtccgcacctaccccgactacaagatcgtggtcctcgacaag
ctcgactactgctccaacctcaagaacctcaacccttccaaatcctcccccaacttcaag
ttcgtcaagggcgacatcgccagcgccgacctcgtcaactaccttctcatcaccgagaac
atcgacaccatcatgcacttcgcagctcaaacccatgttgataactccttcggtaacagc
tttgagttcaccaagaacaatatctacgggacccatgtgcttttggaggcttgtaaagtc
actgggcagatcaggaggtttattcatgtgagtactgatgaggtttatggagagactgat
gaggatgcttccgtggggaatcatgaagcttctcagttgcttccgactaatccatattct
gctactaaggcgggtgctgagatgcttgtgatggcgtatgggagatcttatgggttgccg
gttattactactcgtgggaataatgtttatggtccgaatcagtttcctgagaagttgatt
cctaagtttattctgttggctatgagtgggaagccgcttccgattcacggagatgggtct
aatgtgaggagttatctctactgtgaagatgttgctgaggcgtttgaggttgttttgcac
aaaggggaggttaaccatgtttataatattgggacgacgaaagagaggagagtgattgat
gtggctaatgatatctccaagctctttgggattaaccctgactccaccattcagtttgtg
gagaaccggccttttaatgaccagaggtacttcctcgatgaccagaagctgaagaaactg
gggtgggcggagcgaaccacttgggaggaagggttgaagaagactatggagtggtacact
gcgaaccctgagtggtggggagatgtttctggagctctgcttcctcatccaaggatgctg
atgatgcctggtgatagactttgtgatagtggtgacgagcacaaggatgctgatggtaat
cagacgttcacggtggttactccccccaagactggtggttctggagacaataaaacgtcc
ttgaagttcctcatctatggtaaaactgggtggctcggtgggcttctagggaaactctgt
gagaagcaagggattgcgtacgagtatgggaaagggagactggaggacagagcttctctt
gtggcggatattcgtagagtcaaacctactcatgtcttcaatgcagccggtttaacgggt
agacccaatgtagactggtgtgagtctcacaaaacagagaccatccgagtgaacgttgct
ggtactttgactctggcagatgtttgcagagagaatggtctgttgatgatgaactttgcc
accggttgtatatttgagtatgacgctgcacatccagaaggttcagggattggcttcaag
gaagaagacaaaccgaacttcaccggttccttctactcaaaaacaaaggcaatggtggaa
gagcttctaagagaatttgacaacgtctgcaccttgagagtgcgtatgccaatctcatcc
gacttgaacaacccacgaaacttcatcaccaagatctctcgttacaacaaagtggtgaac
atcccaaacagcatgaccatactagacgaactcttaccaatctcaatcgagatggcgaag
aggaacctgagggggatatggaacttcaccaatccaggagtggtgagccacaacgagata
ctagagatgtacaagagttacatcgagcctggtttcaaatggtccaacttcactttggaa
gaacaggctaaagtcattgttgcaccgcggagcaacaacgagatggatggtgccaagctc
agcaaggagtttccagagttgctttccatcaaagactcgttgatcaaatacgtcttcgaa
cccaacaagagaacgtaa
DBGET
integrated database retrieval system
